Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g03806 ATGGCAAAGCGTTTGATTCCAACCTTCAACCGCATTCTCGTCGAGAAAATCGTCCCTCCTTCCAAAACCTCCGCCGGTATTCTCCTCCCGGAGAAAACCTCACAGCTTAATTCCGGAAAGGTTGTTGCTGTTGGACCTGGATCGAGAGACAGATCGGGAAATTTGATTCCGGTGTCTGTTAAGGAAGGTGACCACGTTCTCTTGCCGGAGTACGGTGGCTCTCAAATTAAGCTTGATGACAAAGAGTTCCATTTGTTTAGGGATGAGGACATTTTGGGTATTCTACATGATTGA 294 0.4694 MAKRLIPTFNRILVEKIVPPSKTSAGILLPEKTSQLNSGKVVAVGPGSRDRSGNLIPVSVKEGDHVLLPEYGGSQIKLDDKEFHLFRDEDILGILHD 97
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g03806 97 Pfam Chaperonin 10 Kd subunit 5 94 IPR020818 GO:0005524|GO:0006457|GO:0044183
Vivi5g03806 97 PANTHER 10 KDA HEAT SHOCK PROTEIN 1 94 IPR020818 GO:0005524|GO:0006457|GO:0044183
Vivi5g03806 97 PRINTS 10kDa chaperonin signature 61 73 IPR020818 GO:0005524|GO:0006457|GO:0044183
Vivi5g03806 97 PRINTS 10kDa chaperonin signature 82 95 IPR020818 GO:0005524|GO:0006457|GO:0044183
Vivi5g03806 97 PRINTS 10kDa chaperonin signature 5 20 IPR020818 GO:0005524|GO:0006457|GO:0044183
Vivi5g03806 97 PRINTS 10kDa chaperonin signature 26 47 IPR020818 GO:0005524|GO:0006457|GO:0044183
Vivi5g03806 97 SMART Cpn10_2 4 95 IPR020818 GO:0005524|GO:0006457|GO:0044183
Vivi5g03806 97 SUPERFAMILY GroES-like 3 96 IPR011032 -
Vivi5g03806 97 Gene3D GroES chaperonin 1 97 IPR037124 GO:0006457
Vivi5g03806 97 CDD cpn10 4 95 IPR020818 GO:0005524|GO:0006457|GO:0044183
Vivi5g03806 97 FunFam 10 kDa chaperonin, mitochondrial 1 97 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g03806 Vivi-Chr5 132139655 132140469 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g03806 3 96 Calmodulin-binding Proteins AT5G20720 36.458 4.85e-12 58.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi5g03806 5 132139655 132140469 Vivi5g03806 5 132139655 132140469 ECH