Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g03753 ATGGAAAGAGACGGTTATAGAAACACCACCGCTGGCCGTAACAGTAACCGTGGCGGTGGCGGTCATGGTCGTGGCAGAGGAAGAGAGTTTCATCAGCAATCAAGTGCCGGTGGTGGTGGCAGAGGAAGAGGAAGGGAGTTTTACCATCATCAAGAAACCGGTGCCGGTAATGGCGGTGGCAGAGGAAGAGGAAGGGAGTTTTACCAGCATCAAGAAACCGGTGCCGGTAATGGCGGTGGCAGAAGAAGAGGAAGGGATTTTTACCAGCATCAAGAAACCGGTACCGGTAATGGCGGTGGCAGAGGAAGAGCAAGAGATTTTTACCAGCATCAAGAAACCGGTGCCGGTAATGGCGGTGGCAGAGGAAGAGGAAGGGAGTTTTACCAGCATCAAGAAACCGGTGCCGGTAATGGCGGTGGCAGAGGAAGAGGAAGGGATTTTTACCAGCATCAAGAAACCGGTACCGGTAATGGCGGTGGCAGAGGAAGAGCAAGAGATTTTTACCAGCATCAAGAAACCGGTGCCGGTAATGGTGGTGGCAGAGGAAGAGCAAGAGATTTTTATCAGCGTCAAGAAACCAGCGCCGGTAATGGTGGTGGCAGAGGAAGGGGAAGAGAGTTTCATCAGCATCAAGAAACCAGTTCCGGTGGTGGTGGCAGAGGAAGGCAGTTTCATCAGCAACAAGAAACTAGTGCCGGTGGTCGCGGTAGTGGAAGAGAGTTTCATCAGCCAGAAGAAACCGGTGCTGATGGTGGTGGAGCCGGAGGGTTACAACCTCAACCACAAAACTGTTGGTCGCGAAGGCCTAATATCACTAAGCACACCAATCTTCAACCTCAAGTCCAAACTCATCCACTTCCAGATATTGGATCTCTGAAAGTAAAAGAGCAGCCAGAGGAAAGTCCAACAACTAGACCCATACGCCGGCCTGACAAGGGCGGGACAGAGTATATTCGCAAATGCAAACTTCATGTGAATCATTTTCCGGTTACCTACGAACCAGAAAAAACTATCATGCACTACGATGTCGATGTGAAACCTACTTTGCCGCCCAGAAATAATTTTTCTCCTCCAAAGAAGATTTCCAAGTTTGAGTTATCTTTAATCAGAAACAAATTGCTTACTGAGAGACCGCTTTTGTTGATGACTGCTTATGATGGAGGATCGAACATCTATAGTGCTAGTGAATTGCCTGAAGAAACTCTTACTGTCGAAGTCTCAAGAGGAGAAGGCGAAAGAACTGTTTCTTATACAGTTACTATAAAGCTGGTGAACAAACTCGAGCTTCGCATGTTGAGAGATTACATTAGGGGCGGAGCGTATTCCATTCCAAGGGATATTTTACAGGGAATGGACTTGGTGGTAAAAGAGAATCCAACAAGACGCACAATTGCTTTAGGACGACGTTTTTTCCCCACTAATCCTACCCTGAAAGAGATGGATCTCACACGGGGAGTAATTGCAATTGGAGGGTTTCATCATAGTCTCAAGACCACAGCTCAAGGTTTATCTTTGTGTCTTGACTATTCAGTTTTGCCTTTTTCAAAGAAAATGCCAGTCCTAGATTTCCTCGTTGAGCGTATCAATAATTTCAATTTGAATCAGTTTGAGAAATTTAGGAAAGTTGTCGAGAAGGAACTCGTTGGATTGAAAGTGAATGTCATTCACAGATTCACCAAACAAAAGTACACCATTACAGGGTTAACACGTGAAAAAACACGCGATATCACTTTCCTTTGTGTGGACCAAGAGGGCCAAAACCCCCCTAGCAGAAAATATCTTACTGACTACTTTAGAGAAAAACACTCCTTTCATATAAAAAACACAGATATTCCTGCATTGGTTTTCGGGGGCAACAAGGCTAATTATATGCCTATGGAGCTCTGCGTCTTGGTTGAAGGTCAGAGATATCCCACAGACAGTCTGGATCTCTTTGCTTCCACGAAGCTGAAAAACATGTCCTTGGCTAGTCCAAAGGATAGAAAATCTTCAATAGAATTGATGATGACGTCCCCTGTTGGACCGCGCAGCGGTGATATTCTTCAGAATTTTGGAATGGATGTCATACCTTCCATGACAAATGTGACCGGACGTGTAATTGCGCCTCCAATATTGAAGTTAGGTGATCCAAATGGAAAGAGTGGTACTGTGAATCTGAGTCTGGAGAAATGTCATTGGAATTTAGTCGGAAAGTCAATGGTAGATGGAAAACCTGTTGAGCATTGGGGTATCCTTGATTTTACCAGCAAGGGATCTATCCACAAATTTAATCGTGGTCAGTTTGTAAAAGATCTTAAGGAAAAGTACAAGAAGTTGGCTATTGACATGAAGGATCCTATTTTGTATGAGGAATCTGAAATGAAGCAACTTGGGGATTACAATTCACTGTCTAAATTACTTGAGCGAATAAGTCAACAGCGGCTGCAGTTTCTTCTTTGTGTGATGGACAAAAGGGTTGAAGGTTACAAGCGCCTCAAGTGGATTGCTGAGACCAAGGTTGGCATAGTGACACAATGCTGCTTATCTAATAAAAGCAATCCTAATAAAGGGAAAGACCAGTATTTAACAAATCTTGCTCTAAAAATCAATGCGAAAATTGGAGGCAGTAATGTAGAGCTCCTTAATAGGATCCCACACTTTGAGAATGACAGGCATGTTATGTTCATAGGGGCTGATGTCAATCATCCAGGTTCTCAGGATATAGAAAGTCCATCAATTGCGGCGGTGGTTGCCACAATTAACTGGCCAGCTGCAAATCGCTATGCAGCACGAGTTTTTGCTCAAGAGCGTCGAATGGAGAAAATTTTGCATTTTGGAAGGGTTTGCCTTGACCTTGTTACACATTATGCAAAGTTAAACAAAGCCAGGCCCGAAAAAATTGTTATCTTTCGAGATGGGGTCAGTGAAAGCCAGTTTTACATGGTTCTTACAGAGGAGTTGAAAGATTTGAAGACTGCATTTGAGAGTATAAATTACTCTCCAAGTATCACTCTTATTGTAGCTCAAAAGCGACATCAAACTCGATTGTTTCCTGTGAGTGCGAATGGGGTTTGTACTGGCAACGTGTTCCCTGGAACCGTTGTAGACACAGATGTGGTACATCCTTTTGAATTTGATTTTTACCTTTGTAGTCACAATGGAAGCCTAGGTACAAGCAAACCAACACACTACCATGTGTTGTGGGATGAGAACAAGTTTAGTTCTGATGATTTGCAGAAACTGATATATAATCTATGCTTTACCTTTGCAAGGTGCACAAAACCTGTATCTTTAGTCCCTCCAGTGTACTATGCCGACCTTGCTGCATATAGAGGAAGACTATACTATGAAGCTAAGAAGTCAGCAAACAGAAATGATGAGCTGTTTTCCGAATTGCATCCTAATACGGAAAACATGATGTTCTTTGTCTGA 3411 0.4371 MERDGYRNTTAGRNSNRGGGGHGRGRGREFHQQSSAGGGGRGRGREFYHHQETGAGNGGGRGRGREFYQHQETGAGNGGGRRRGRDFYQHQETGTGNGGGRGRARDFYQHQETGAGNGGGRGRGREFYQHQETGAGNGGGRGRGRDFYQHQETGTGNGGGRGRARDFYQHQETGAGNGGGRGRARDFYQRQETSAGNGGGRGRGREFHQHQETSSGGGGRGRQFHQQQETSAGGRGSGREFHQPEETGADGGGAGGLQPQPQNCWSRRPNITKHTNLQPQVQTHPLPDIGSLKVKEQPEESPTTRPIRRPDKGGTEYIRKCKLHVNHFPVTYEPEKTIMHYDVDVKPTLPPRNNFSPPKKISKFELSLIRNKLLTERPLLLMTAYDGGSNIYSASELPEETLTVEVSRGEGERTVSYTVTIKLVNKLELRMLRDYIRGGAYSIPRDILQGMDLVVKENPTRRTIALGRRFFPTNPTLKEMDLTRGVIAIGGFHHSLKTTAQGLSLCLDYSVLPFSKKMPVLDFLVERINNFNLNQFEKFRKVVEKELVGLKVNVIHRFTKQKYTITGLTREKTRDITFLCVDQEGQNPPSRKYLTDYFREKHSFHIKNTDIPALVFGGNKANYMPMELCVLVEGQRYPTDSLDLFASTKLKNMSLASPKDRKSSIELMMTSPVGPRSGDILQNFGMDVIPSMTNVTGRVIAPPILKLGDPNGKSGTVNLSLEKCHWNLVGKSMVDGKPVEHWGILDFTSKGSIHKFNRGQFVKDLKEKYKKLAIDMKDPILYEESEMKQLGDYNSLSKLLERISQQRLQFLLCVMDKRVEGYKRLKWIAETKVGIVTQCCLSNKSNPNKGKDQYLTNLALKINAKIGGSNVELLNRIPHFENDRHVMFIGADVNHPGSQDIESPSIAAVVATINWPAANRYAARVFAQERRMEKILHFGRVCLDLVTHYAKLNKARPEKIVIFRDGVSESQFYMVLTEELKDLKTAFESINYSPSITLIVAQKRHQTRLFPVSANGVCTGNVFPGTVVDTDVVHPFEFDFYLCSHNGSLGTSKPTHYHVLWDENKFSSDDLQKLIYNLCFTFARCTKPVSLVPPVYYADLAAYRGRLYYEAKKSANRNDELFSELHPNTENMMFFV 1136
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g03753 1136 MobiDBLite consensus disorder prediction 1 165 - -
Vivi5g03753 1136 Gene3D paz domain 513 637 - -
Vivi5g03753 1136 ProSiteProfiles Piwi domain profile. 810 1110 IPR003165 GO:0003676
Vivi5g03753 1136 Pfam N-terminal domain of argonaute 319 454 IPR032474 -
Vivi5g03753 1136 MobiDBLite consensus disorder prediction 293 314 - -
Vivi5g03753 1136 SMART Piwi_a_2 810 1110 IPR003165 GO:0003676
Vivi5g03753 1136 SMART DUF1785_2 464 517 IPR014811 -
Vivi5g03753 1136 CDD PAZ_argonaute_like 518 632 - -
Vivi5g03753 1136 Gene3D - 699 874 - -
Vivi5g03753 1136 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 317 1112 - -
Vivi5g03753 1136 MobiDBLite consensus disorder prediction 211 234 - -
Vivi5g03753 1136 SUPERFAMILY Ribonuclease H-like 795 1110 IPR012337 -
Vivi5g03753 1136 Pfam Argonaute linker 1 domain 467 514 IPR014811 -
Vivi5g03753 1136 Gene3D - 880 1136 IPR036397 GO:0003676
Vivi5g03753 1136 MobiDBLite consensus disorder prediction 192 314 - -
Vivi5g03753 1136 Pfam PAZ domain 526 642 IPR003100 GO:0005515
Vivi5g03753 1136 CDD Piwi_ago-like 680 1109 IPR045246 -
Vivi5g03753 1136 SMART PAZ_2_a_3 518 656 IPR003100 GO:0005515
Vivi5g03753 1136 SUPERFAMILY PAZ domain 514 666 IPR036085 GO:0005515
Vivi5g03753 1136 ProSiteProfiles PAZ domain profile. 518 633 IPR003100 GO:0005515
Vivi5g03753 1136 MobiDBLite consensus disorder prediction 259 285 - -
Vivi5g03753 1136 Pfam Piwi domain 811 1109 IPR003165 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g03753 Vivi-Chr5 131232219 131236349 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi5g03753 5 131232219 131236349 Vivi5g03753 5 131232219 131236349 ECH