Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g03748 ATGCTGCAGATTTCCAAGAAATTCACACCATTCTTTATTGTATTCTTCATAGCATTTTCTGTTGTTCTCATCATGCACTCAAAATCAAGTTTCTTTCTCTTTGAGGTGTTTACAAGTGACAAGATGCAATTTGTTGGAGAAAATAAAAATGCTCACAACATTAAAAATGTTACAACCAATGGAGGAACAGTTCAGAACATATCTGTTCACAACTTCAAAGGAGCCTATAACAATGTCGAAAATAACACCGCGTCAAAGGTGGAAGAAAAGTTTGAAAATGGCTCATTGATAAGTTCCACAAATAACATAGAGAAATTTCTTGATGGACTTCTAGATTCTAGATTTGATGAACCATCATGCATGAGTAGGTATCATTCTCACTTATACCGCAAAGCTTCGTCTCATAAACCTTCTTCATATTTAATATCGAAACTACGAAACTATGAAGAAATTCATAGAAGGTGTGGACCTAATAGTAAAGCTTACCACAGAAGCATGACAAAGATTTTACATTCCAAGAGCATTAAAGATGATGCTGCTATGTGCAAATATCTTATTTGGAAACCAGCTAATGGTTTAGGGAACCAAATGGTTAGCATGGTTGCGACATTTCTATATGCTCTCCTCACAAATCGAGTGATGCTCGTAAGTTTCGGGAAAGACAAACAAGGTCTATTTTGCGAACCGTTTCTGAATTCCACTTGGCTATTACCAGAAAACTCTCCATTTTGGAATGAAAATCATGTTGAAACATATCAAAGCATGATAGAGAAGGAAAAAGCTAACAATAATTCAAATCTGGATTTGCCTTCAGCACTTTTTCTCAATCTACAATACCAAAAAAAAATTCATGAGAAGTTTTTTCATTGTGATGATAGTCAAGCTCTTCTCGTTAGGGTTCCTTTGTTGATTTTGCGATCAGATCAATACTTTGCACCTTCTCTTTTCATAACGCCTTTTTTCAACAACGAACTTGAGAAAATGTTCGTTGAAAAAGACACAGTTTTTCACCATTTGGGACGCTACCTCTTCCACCCTTCAAATTCAGCATGGAGACTAATCACAAATATCTATCAAAAACACTTGGCTAAAGCAGATGAGAAAATAGGCCTTCAGATAAGAGTTTATAAGCCTACCGCAACTCCACAGCAAGTAATTATGAATCTAGTTTTAAATTGCACACTAGAAAATAAGCTTCTTCCAAAAGTACTTGATATAAAAAGTTCATTCTCTTCTATTGGCAAAGACAGAGTGATTAAGAAGGTAGTTCTTGTGGCGTCTTTAAATCCACAATACGGTGAGAATTTAAAGACGATGTATATGAATAAATCAACAACGGTTACAGGTCAAGTAATAGAATTTTTTCAACCAAGTCATGAAGAGCAGCAAAAATTTTATGATAATGAGCATAATATGAAGGCTTGGGTTGATATGTACTTGCTAAGTTTATCTGATATATTGGTTACTACTTCTTTGTCTACTTTTGGATATGTTGCTCAAGGTTTGGGAAACTTGAGGCCTTGGATTCTTTATAAGGTAGTAACCAATAAAACTCATTATCCAGCTTGTGAAAGAGAGTTCTCAATGGAACCTTGTTATCATTCTCCTCCTAAGCATTTTTGTAGTGGTAAGCCTATAATTGAATTTTCTTCTTCTTTTCTCTATATGAGGGAATGTAAGGATTATGGTTTTGGTGTAAAGCTTGTTAATTAA 1713 0.3468 MLQISKKFTPFFIVFFIAFSVVLIMHSKSSFFLFEVFTSDKMQFVGENKNAHNIKNVTTNGGTVQNISVHNFKGAYNNVENNTASKVEEKFENGSLISSTNNIEKFLDGLLDSRFDEPSCMSRYHSHLYRKASSHKPSSYLISKLRNYEEIHRRCGPNSKAYHRSMTKILHSKSIKDDAAMCKYLIWKPANGLGNQMVSMVATFLYALLTNRVMLVSFGKDKQGLFCEPFLNSTWLLPENSPFWNENHVETYQSMIEKEKANNNSNLDLPSALFLNLQYQKKIHEKFFHCDDSQALLVRVPLLILRSDQYFAPSLFITPFFNNELEKMFVEKDTVFHHLGRYLFHPSNSAWRLITNIYQKHLAKADEKIGLQIRVYKPTATPQQVIMNLVLNCTLENKLLPKVLDIKSSFSSIGKDRVIKKVVLVASLNPQYGENLKTMYMNKSTTVTGQVIEFFQPSHEEQQKFYDNEHNMKAWVDMYLLSLSDILVTTSLSTFGYVAQGLGNLRPWILYKVVTNKTHYPACEREFSMEPCYHSPPKHFCSGKPIIEFSSSFLYMRECKDYGFGVKLVN 570
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g03748 570 Pfam Xyloglucan fucosyltransferase 89 541 IPR004938 GO:0008107|GO:0016020|GO:0042546
Vivi5g03748 570 Gene3D - 354 518 - -
Vivi5g03748 570 PANTHER FUCOSYLTRANSFERASE 2-RELATED 13 570 IPR004938 GO:0008107|GO:0016020|GO:0042546
Vivi5g03748 570 FunFam Galactoside 2-alpha-L-fucosyltransferase 180 231 - -
Vivi5g03748 570 Gene3D - 180 234 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g03748 Vivi-Chr5 131089310 131091212 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g03748 81 569 Xyloglucan Fucosyltransferase1 AT2G03220 45.674 1.58e-150 442
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g03748 K13681 - gmx:100809919 694.115