Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g03670 ATGGATATGGATTGGTCCCCTCAAGGTCAAGTAGTGTGTTCTTCTATGTGGAAATTTCCACATAGAAGAACACTAAAAGAAAAGGAGATCAAATGCAACATTGCAGGTTCAACTTTAGGGATTCCTTCTTTGTGTGCTTGTGATGGCATTTTCAGAAATGACTTGATGGATCACTTGGATAGTTTCTCTTCTTTTATTGGTCCAGACAATGTGTTTTTCTCTATATTAACTGGTGCAATGTTAGCATTAGAGGGTTTGGATAAAAAATTTAAGAAGCTTTGGCTAGAAACAAGTTTAATGGTAGTGGCATTTTTAGGTAATTTGATGGATCACCTGGAAAGTTTCTCTTCTTTTATTGGTCCATACAATATCTTTTTCTTTGTAGCAACTGATGCAATGTTGGCTTTGGAGGATTTGGATAAAAATTGGAAGAAGCTCTGGCTAGAAAAATATTTAATGATAAACAGAACAAAAAATTCTTGTTCACATGGTTTTTGTTTCATCTATTTCTCAGTAACTTGTAAACTCTCTTCTCTTACATCTTTCCCAATAATTCTTCAAGCCACTAAAGTTAGGATGCTGCAGATTTCCAAGAAATTCACACCATTCTTTATTGTATTCTTCATAGCATTTTCTGTTGTTCTCATCACGCACTCAAAATCAAGTTTCTTTCTCTTTGAGGTGTTTACAAGTGACAAGATGCAATTAGTTGGAGAAAATAAAAATGCTCACAACATTACAAATGTTACAACCAATAGAGGAGAAGTTCATAACATATCAGGTCACAACTTCAAAGGAGACTATAACAATGTCGAAAATAACACCGCGTCAAAGGTGGAAGAAAAGTTTGAAAATGGCTCATTGATAAGTTACACAAATAAAATAGAGAAATTTCTTGATGGACTTCTAGATTCTAGATTTGATGAACCATCATGCATGAGTAGGTATGAATCTCATTTATATCGCGAAGCTTCCCCTCATAAACCTTCTTTATATTTAATATCGAAACTACGAAACTATGAAGAAATTCATAGAAGGTGTGGACCTAATAGTAAAGCTTACCACAGAAGCATGACAAAGATTTTACATTCCAAGAGCATTAAAGGTGATGCTGCAATGTGCAAATATCTTATTTGGAAACCCGCTAATGGTTTAGGGAACCAAATGGTTAGCATGGTTGCGACATTTCTATATGCTCTCCTCACAAACCGCGTGATGCTCGTAAGTTTCGGGAAAGACAAACAAGGTCTATTTTGCGAACCGTTTCTGAATTCCACTTGGCTATTACCAGAAAACTCTCCATTTTGGAATGAAAATCATGTTGAAACATATCAAAGCATGATAGAGAAGGAAAAAGCTAACAATAATTCAAATCTGGATTTGCCTTCAGCACTTTTTCTCAATCTACAATACCAAAAAAAAATTCATGAGAAGTTTTTTCATTGTGATGATAGTCAAGCTCTTCTCGTTAGGGTTCCTTTGTTGATTTTGCGATCAGATCAATATTTTGTACCTTCTCTTTTCATAACGCCTTTTTTCAACAACGAACTTGAGAAAATGTTCGTCGAAAAAGACACGGTTTTTCACCATCTAGGACGCTACCTCTTCCATCCTTCGAATTCGGCATGGAGACAAATCACAGATATCTATCAAAGATACTTGGCTAAAGCAGATGAGAAAATAGGCCTTCAGATAAGAGTTTATAAGCCTACCGCAACTCCTCAGCAAGTAATCATGAATCTAGTTTTAAATTGCACACTAGAAAATAACCTCCTTCCGAAAGTACTTGATATAAAAAGTTCATTCTCTTCTATTGGCAAAGACAAAGCGATTAAGAAGGTAGTTCTTGTGGCGTCTTTAAATCCACAATACGGTGAGAATTTAAAGACGATGTATATGAATAAATCAACGGTTACAGGACAAGTAATAGAAATTTTTCAACCAAGTCATGAAGAGCAGCAAAAATTTTATGACAATGAGCATAATATGAAGGCTTGGGTTGATATGTACTTGCTAAGTTTATCTGATGTATTGGTTACTACTTCTTTGTCTACTTTTGGTTATGTAGCTCAAGGTTTGGGAAATTTGAGGCCTTGGATACTTTATAAGGTAGTAACAAATAAAACTCATTTTCCAGCTTGTGAAAGAGAGTTCTCAATGGAACCTTGTTATCATTCTCCTCCTAAGCATTTTTGTAGTGGAAAGCCTATAATAGAATTTTCTTCTTCTTTTCTCTATATGAGGGAATGTAAGGATTATGGTTTTGGTGTAAAGCTTGTTAATTAA 2286 0.3486 MDMDWSPQGQVVCSSMWKFPHRRTLKEKEIKCNIAGSTLGIPSLCACDGIFRNDLMDHLDSFSSFIGPDNVFFSILTGAMLALEGLDKKFKKLWLETSLMVVAFLGNLMDHLESFSSFIGPYNIFFFVATDAMLALEDLDKNWKKLWLEKYLMINRTKNSCSHGFCFIYFSVTCKLSSLTSFPIILQATKVRMLQISKKFTPFFIVFFIAFSVVLITHSKSSFFLFEVFTSDKMQLVGENKNAHNITNVTTNRGEVHNISGHNFKGDYNNVENNTASKVEEKFENGSLISYTNKIEKFLDGLLDSRFDEPSCMSRYESHLYREASPHKPSLYLISKLRNYEEIHRRCGPNSKAYHRSMTKILHSKSIKGDAAMCKYLIWKPANGLGNQMVSMVATFLYALLTNRVMLVSFGKDKQGLFCEPFLNSTWLLPENSPFWNENHVETYQSMIEKEKANNNSNLDLPSALFLNLQYQKKIHEKFFHCDDSQALLVRVPLLILRSDQYFVPSLFITPFFNNELEKMFVEKDTVFHHLGRYLFHPSNSAWRQITDIYQRYLAKADEKIGLQIRVYKPTATPQQVIMNLVLNCTLENNLLPKVLDIKSSFSSIGKDKAIKKVVLVASLNPQYGENLKTMYMNKSTVTGQVIEIFQPSHEEQQKFYDNEHNMKAWVDMYLLSLSDVLVTTSLSTFGYVAQGLGNLRPWILYKVVTNKTHFPACEREFSMEPCYHSPPKHFCSGKPIIEFSSSFLYMRECKDYGFGVKLVN 761
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g03670 761 PANTHER FUCOSYLTRANSFERASE 2-RELATED 204 761 IPR004938 GO:0008107|GO:0016020|GO:0042546
Vivi5g03670 761 FunFam Galactoside 2-alpha-L-fucosyltransferase 372 423 - -
Vivi5g03670 761 Gene3D - 538 708 - -
Vivi5g03670 761 Gene3D - 372 425 - -
Vivi5g03670 761 Pfam Xyloglucan fucosyltransferase 291 732 IPR004938 GO:0008107|GO:0016020|GO:0042546
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g03670 Vivi-Chr5 130131477 130138692 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g03670 262 760 Xyloglucan Fucosyltransferase1 AT2G03220 45.652 1.37e-149 447
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g03670 K13681 - gmx:100809919 700.664