Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g00132 ATGGAAATCTTTCAAGTCACTAAGGATAGGATGATGCAGAGTTTCAAGAAATTGACACCATTATTTGTTGTAATCTTGATAGCACTTCCTTTTATTCTCATGAACTCAAAATCAAAATCAAGCTTCTCTCTCTTTGAGGAGTTTACGAAAGAAAAAATGCTACAACTTGTTGGAGAAAATAAAAATGGTGACAACATAAGCAATGGAGGAAGAGTTCATAATATATCAAATGACAACATCAATGGAGGCTATAACAATGGCGAAAATAACACCGAGTCAAAAGTGCAAGGAAAAATTCAAAATAATACTACAACAGTTGAAGGAAGATCAGCTACAACAATAGGTTCCACAAATATCTTAGAGAAATTTCTTGATGGACTTTTAGCTTCTGGGATTGATGAACCATCATGCATGAGTAGGCATCAGTCTCATTTATACCGGAAAGCTTCGCCTCATAAACCATCTTCGTATTTGATATCGAAACTACGAAAATACGAAGAAATTCATAGGAAATGTGGACCTAATAGTAAAGCTTATCACAAAAGCATGAAAAAGATTCTAGATTCTAAGAGAATTAAGAGCGGTCATGTAATGTGCAAATATCTTATTTGGACACCGGCTAATGGTTTGGGGAACCAAATGATTAGTATGGCTGCAACATTTCTTTATTCTCTCCTCACAGACCGCGTTATGCTCGTGAGATTCGGGAAAGACAAACAAGGTCTATTCTGCGAGCCGTTTCTGAATTCAACATGGTTGTTGCCTGAGAATTCTCCTTTTTGGAGTGTCAATCATGTTGAAACATATGAAAGCTTGATAGAGAAGGAAAAAGCTAACAGTAATTCAAAATTGGATTTTCCATCTGCACTATTTCTCAATCTACAATACCAAGAGAATTATCATGAGAAGTTTTTTCACTGTGATGATAAACAAGCTCTTCTTATCAAGGCTCCTTTGTTGATTTTGCAATCAGATCAATATTATGTACCTTCGCTTTTCATGACACCTTTGTTCAACAAGGAACTTGAGAAAATGTTCGTCAAAAAAGACACGGTTTTTCACCATCTTGGACGCTACCTTTTCCACCCTTCGAATTCGGCATGGAGACTAATCACAAATTTCTATCACGAACACTTGGCTAAAGCAGATGAGAAAATAGGCCTTCAGATAAGAGTTTTTAGGCCTAATACGACTCCACAACAAGCAATTATGAATTTAGTTTTAAATTGCACACTAGAAAATAAGCTTCTTCCAAAAGTACTTTATACGAATAATTCAGCGTCTTCTAGTGGCATAAACAAGATGATTACAAAGGCTGTTCTTGTGACGTCTTTATATCCTGAATACGGTGAGAATTTAAAGATGATGTATATGAATAAATCAACGGTTACAGGAGAAATAATTGAAGTTTATCAACCAAGCGGCGAGGAGGAACAAAAATTTAACGATAATACGCATAATATGAAGGCTTTGGTTGATATGTATTTACTAAGTCTATCTGATGTGTTGGTTACGACTTCTTTGTCTACATTTGGATATGTTGCTCAAGGTTTTGGAAATTTGAAGCCATGGCTTCTATACAGGATAGTAAGCAATGAGACTCATTATCCAGCTTGTGAAAGAGAGTTCTCAATGGAGCCTTGTTACCATTATCCTCCTAAGCATTTTTGTAGTGGAAAGCCTATACATGATTTTGCTTCTTCTTTCATTTATATGAGGCAATGTAAGGATTATAGTTCTGGTGTAAAGATGATTAATGATTTTTGA 1767 0.3543 MEIFQVTKDRMMQSFKKLTPLFVVILIALPFILMNSKSKSSFSLFEEFTKEKMLQLVGENKNGDNISNGGRVHNISNDNINGGYNNGENNTESKVQGKIQNNTTTVEGRSATTIGSTNILEKFLDGLLASGIDEPSCMSRHQSHLYRKASPHKPSSYLISKLRKYEEIHRKCGPNSKAYHKSMKKILDSKRIKSGHVMCKYLIWTPANGLGNQMISMAATFLYSLLTDRVMLVRFGKDKQGLFCEPFLNSTWLLPENSPFWSVNHVETYESLIEKEKANSNSKLDFPSALFLNLQYQENYHEKFFHCDDKQALLIKAPLLILQSDQYYVPSLFMTPLFNKELEKMFVKKDTVFHHLGRYLFHPSNSAWRLITNFYHEHLAKADEKIGLQIRVFRPNTTPQQAIMNLVLNCTLENKLLPKVLYTNNSASSSGINKMITKAVLVTSLYPEYGENLKMMYMNKSTVTGEIIEVYQPSGEEEQKFNDNTHNMKALVDMYLLSLSDVLVTTSLSTFGYVAQGFGNLKPWLLYRIVSNETHYPACEREFSMEPCYHYPPKHFCSGKPIHDFASSFIYMRQCKDYSSGVKMINDF 588
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g00132 588 FunFam Galactoside 2-alpha-L-fucosyltransferase 197 248 - -
Vivi5g00132 588 Pfam Xyloglucan fucosyltransferase 116 557 IPR004938 GO:0008107|GO:0016020|GO:0042546
Vivi5g00132 588 PANTHER FUCOSYLTRANSFERASE 2-RELATED 21 586 IPR004938 GO:0008107|GO:0016020|GO:0042546
Vivi5g00132 588 Gene3D - 197 317 - -
Vivi5g00132 588 Gene3D - 371 527 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g00132 Vivi-Chr5 1760095 1763176 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g00132 117 585 Xyloglucan Fucosyltransferase1 AT2G03220 49.370 1.23e-154 453
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g00132 K13681 - gmx:100809919 698.738
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi2g07577 2 221081153 221083237 Vivi5g00132 5 1760095 1763176 PCT