Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g00129 ATGTATATGGCAAGTGAAATACTTCAAATCTTGAAGGATAAGAAGAAAGCAATTTCAATGAGACTTAAAATGTCTTTTGTTGTGTTTGTGAGAGCTCTCTTAATAGTTATCATGGTTACTTTAATTTACCAAAATGCTAGTTTTGTGCAATTTGAGATGTTTTCAGAAGACATTAAAATGAAGGGCATGGTTCAGAAGAACATTACATCTAGAGGGCCAAATGCTACCATTAATGTGAGACAAAATATAACACATGAAAAAGTTGGAGTAAAAGATGAGATTGATGCCAAATTCAAAAAATTTATTGGCTCTAAAAATATCTTGTTGACTAATTCAACAAATAATTCAACTCCAACCTCGTCAAAAGGGATCATTGATGACAACGAAGAGAAATTACTTGATGGACTTTTAGTTTCTGGATTTGATCAAGCATCATGCATAAGCAGGTTACAATCTCATTTTTATCACAAATCTTCTCCGCATAAACCTTCTCCATATTTGATATCCAAACTAAGAAAATATGAAGAAATTCATAGAAAATGTGGACCAAACACTAGAGCTTACAATAGAGATATGGAAATTATTGTAAACTCTAAGAACAATAATGATTCATCTCGTGCTTTAACCACTTGCAAATACATTATTTGGGTACCCGCATATGGTTTAGGTAACCAAATAATTAGTATAGTTTCATCATTTCTTTACGCGCTCCTAACAGATCGTGTTATGCTCGTAAAATTCGGAAAAGACAAAGAGGGATTATTTTGCGAGCCATTTCTAAATTCAACTTGGTTGTTACCGGAGAAATCACCTTTTTGGAATGCAAGAAATGTTCAATCATATCAAAGAACTATAGATATGGAACTATCCAATACATTAAATGAAGATTTGCCATTAGCTTTGCATGTGGACTTAAGATATAGTCCATCACATGATGAGAGATTTTTTCATTGTGATCACAGTCAATTTCTCCTCAGTAAAATTCCTCTATTATTTTTGGAAGCAGGTCAGTATTTTGTTCCTTCTTTTTTCATGACACCAATTTTTCAAAAAGAATTAAACAAAATGTTTCCAGAAATTACTTCAATTTTCCATCATTTGGTACGCTACTTATTTCACCCTTCAAACGAAGCGTGGAAACTAATCACTAGTTTCTATCAACAACACCTTGCTAAAGCGAATGAAATAATCGGACTTCAAATAAGAGTATTGAATACTGAATCAACTCCACACGAACTTTTCATGAATCGAATTTTAAATTGCACATTAGAGAATAAATTACTTCCAAATGTACTTGATACAAAAAACACTTCAATGTCTTCTAATGGCAAAAACAAGACGATTATAAAAGCTATTCTCGTGGCATCATTATATTCACAATATAGTGAGAATTTGAAGATGATGTATATGAATAAATCAACGGTTACTGGAGAAATAATTGAGGTTTATCAACCAAGTAGTGAAAAGAAACAAATATTTGATGATAATAAGCATAATTTGAAGGCTTGGGTTGATATGTATTTACTTAGTTTATCTGATGAATTGGTAACTACATATCAATCTACTTTTGGCTATGTTGCTAAGGGATTAGGAAATTCAAAACCATGGATTCTTTATAATCCTGCTCATGATATAGAGATTTGTGAACGTGAGTTTACATTAGAGCCATGTTATCATTCTCCTCCTAGACATTATTGTGATAGTGGAGATGTTATTGAAGATGTTGCTTCCTCTTTTCCTAATATTCGACGTTGTAAGGATTTTCGTTATGGGTGGAAGTTAGTTAATAGTTCTGCTTAA 1800 0.3206 MYMASEILQILKDKKKAISMRLKMSFVVFVRALLIVIMVTLIYQNASFVQFEMFSEDIKMKGMVQKNITSRGPNATINVRQNITHEKVGVKDEIDAKFKKFIGSKNILLTNSTNNSTPTSSKGIIDDNEEKLLDGLLVSGFDQASCISRLQSHFYHKSSPHKPSPYLISKLRKYEEIHRKCGPNTRAYNRDMEIIVNSKNNNDSSRALTTCKYIIWVPAYGLGNQIISIVSSFLYALLTDRVMLVKFGKDKEGLFCEPFLNSTWLLPEKSPFWNARNVQSYQRTIDMELSNTLNEDLPLALHVDLRYSPSHDERFFHCDHSQFLLSKIPLLFLEAGQYFVPSFFMTPIFQKELNKMFPEITSIFHHLVRYLFHPSNEAWKLITSFYQQHLAKANEIIGLQIRVLNTESTPHELFMNRILNCTLENKLLPNVLDTKNTSMSSNGKNKTIIKAILVASLYSQYSENLKMMYMNKSTVTGEIIEVYQPSSEKKQIFDDNKHNLKAWVDMYLLSLSDELVTTYQSTFGYVAKGLGNSKPWILYNPAHDIEICEREFTLEPCYHSPPRHYCDSGDVIEDVASSFPNIRRCKDFRYGWKLVNSSA 599
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g00129 599 Pfam Xyloglucan fucosyltransferase 116 566 IPR004938 GO:0008107|GO:0016020|GO:0042546
Vivi5g00129 599 Gene3D - 208 261 - -
Vivi5g00129 599 Gene3D - 379 552 - -
Vivi5g00129 599 FunFam Galactoside 2-alpha-L-fucosyltransferase 209 260 - -
Vivi5g00129 599 PANTHER FUCOSYLTRANSFERASE 2-RELATED 28 596 IPR004938 GO:0008107|GO:0016020|GO:0042546
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g00129 Vivi-Chr5 1669230 1672308 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g00129 128 595 Xyloglucan Fucosyltransferase1 AT2G03220 45.702 7.48e-142 421
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g00129 K13681 - gmx:100818288 644.81