Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g06000 ATGCACCTGAGCGAGAATGAAGGAATTGAGGGGAAGACTTTCGTGGTGACAGGTGGACTCGGATTCGTAGGATCTGCTCTGTGCTTGGAACTCATACGTAGAGGTGCTCAACAGGTCCGATCCTTTGACCTCCGCGATTCTTCTCCTTGGTCGCATATTCTCAAACACAAGGGAGTCAACTGCATACAAGGGGATGTTTCCCGCAAAGAGGATGTTGAAAGGGCACTCCGAGGTGCTCAATGTGTATTCCACCTTGCGGCCTTTGGTATGTCAGGTAAAGAGATGCTTCAATTCGGTAGAGTTGATGAAATCAATATAAATGGGACATGCCATGTTATCGACGTTTGTCTTGACCTTGGTATCAAAAGACTTGTCTATTGTAGCACATATAATGTTGTCTTTGGTGGTCAGAAGATCATCAACGGAAATGAGAGCTTGCCTTATATTCCAATTGATACTCATGTTGATCCGTATGGCCGCAGTAAATCAATTGCTGAACAGTTTGTTCTAAAGAATAATGCTCGCCCTCTCAAGAACGACGCTGGAAATCGTCTTTACACTTGTGCTGTTCGTCCCGCTGCAATCTATGGACCAGGGGAAGACAGGCACCTTCCGAGGATCATAACCATGGCAAGGTTGGGTCTGATTCTGTTCAGAATTGGCGACAAAACTGTAAAGTCAGATTGGGTTTATGTGGATAACCTTGTCCTTGCTCTCATATTGGCAAGTATGGGACTTTTGGATGACAATATTGAAAAGGGAAAACGACCTATCGCTGCTGGCCAGGCATACTTCATATCTGATGGTTCACCTGTCAATTCTTTTGAATTCCTCCAACCTCTACTCACGAGTTTGGATTATCAACTACCCGAAACATCTTTATCTGTCGAACACGCTCTTTTTCTTGGGAGGATTTGCCAGGGTGTTTATACAATCTTATATCCATGGCTTAATCAACGGTGGCTCCCTCAACCATTCATCCTTCCAAGTGAAGTACACAAGGTGGGAGTGACCCACAATTTCTCTTATCTTAAAGCCAGAGAGGAGATTGGCTATGTTCCCATGGTGACCCCGCGGGAGGGGATGGATTCTACCATAACTTACTGGAAACAGAGAAAAAGGCAAATTCTGGATGGGCCTACCGTTTATGCGTGGCTATTTTGTGCCATTGGAATGACCTCACTCTTCTGTGCTGCTTTTCTACCAGACACAATATGGATTGTGTCTCTTTTGAGAGCTATATGTCTATTCGTGTTTGGATCAATATGGATGACAAGGCTGGTATTTTTGATGGCGACAGCTGCACATGTGATTGAGGGCAGTTATGCCTGGTACCTGGCTAAAAGGGTGGATCCTGCAAATGCAAGAGGCTGGTTTTGGCAAACATTTGCTCTGGGGTTCTTTTCATTGCGTTTTCTATTGAAAAGAGCAAGGGAATAA 1440 0.4472 MHLSENEGIEGKTFVVTGGLGFVGSALCLELIRRGAQQVRSFDLRDSSPWSHILKHKGVNCIQGDVSRKEDVERALRGAQCVFHLAAFGMSGKEMLQFGRVDEININGTCHVIDVCLDLGIKRLVYCSTYNVVFGGQKIINGNESLPYIPIDTHVDPYGRSKSIAEQFVLKNNARPLKNDAGNRLYTCAVRPAAIYGPGEDRHLPRIITMARLGLILFRIGDKTVKSDWVYVDNLVLALILASMGLLDDNIEKGKRPIAAGQAYFISDGSPVNSFEFLQPLLTSLDYQLPETSLSVEHALFLGRICQGVYTILYPWLNQRWLPQPFILPSEVHKVGVTHNFSYLKAREEIGYVPMVTPREGMDSTITYWKQRKRQILDGPTVYAWLFCAIGMTSLFCAAFLPDTIWIVSLLRAICLFVFGSIWMTRLVFLMATAAHVIEGSYAWYLAKRVDPANARGWFWQTFALGFFSLRFLLKRARE 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g06000 479 Gene3D - 3 375 - -
Vivi4g06000 479 Pfam 3-beta hydroxysteroid dehydrogenase/isomerase family 15 294 IPR002225 GO:0003854|GO:0006694|GO:0016616
Vivi4g06000 479 Pfam Transmembrane protein 254 387 474 IPR028110 -
Vivi4g06000 479 PANTHER BIFUNCTIONAL POLYMYXIN RESISTANCE PROTEIN ARNA 12 371 - -
Vivi4g06000 479 FunFam Short-chain dehydrogenase/reductase family 42E member 1 3 375 - -
Vivi4g06000 479 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 9 377 IPR036291 -
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi4g06000 4 197224722 197227304 Vivi4g06000 4 197224722 197227304 ECH