Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g05894 ATGGACCGAAGGTGGCCTTGGAAGAAAAAATCATCTGATAAGACTGTGCTGGAGAAAGTAGCTGCTGAATTGGATTCTGCTGGTGCCTCTAATCAGGAAAATCAGGATGTTTATAAGAAGCCGAAATATGTACAAATCTCTGTAGAATCATATTCACATTTGACGGGTTTGGAAGATCAAGTGAAGACATATGAAGAAAAGGTAGAGACACTTGAGGATGAGATCGCGGAATTAAATGAAAAACTATCAGCAGCAAACACAGAGATAACTACCAAGGAAGGTTTGGTAAAACAACATGCTAAAGTAGCTGAAGATGCTGTCTCAGGCTGGGAAAAGGCAGAAGCAGAAGCTTTGGCGTTAAAGAACCATCTAGAATCTGTCACTCTTTCAAAACTTACTGCTGAGGATCAGGCATCGCAGTTAGATGGTGCTCTTAAGGAGTGTATGCGACAGATAAGAAACCTGAAAGAAGAACATGAACTGAAAATACAGGAAGTCGCCCTTGCAAAAACCAAGCAATTGGACAAGATTAAGGGTGAGTTTGAGGCTAGGATACGGAATTTTGAACAGGAACTCCTCAGGTCTGCTGCTGATAATGCAGCTCTGTCAAGGTCCTTGCAGGAACGTTCTAACATGCTAGTCAAACTAAGTGAAGAAAAAGCTCATGCTGAGGCTGAAATTGAGCATCATAAGAGCAACGTAGAATCATGTGAAAGAGAAATCAATTCACTTAAATACGAGCTTCATGTTATTTCCAAAGAGCTTGAAATTCGTAATGAAGAAAAGAACATGAGTATGAGGTCTGCAGAAGCTGCTAACAAGCAGCATGCAGAGGGTGTAAAAAAAATTGCCAAGTTAGAGGCAGAGTGCCAAAGGTTACGTGGTCTAGTACGGAAAAAGTTACCCGGTCCTGCTGCGCTTGCACAAATGAAGCTGGAAGTTGAAAGTCTTGGCCGAGATTATGGAGAAACTCGATTGAGGAAGTCTCCTGTCAAACCTGCTAGTTCTCATTTCTCTCCGGTGCCTGATTTCTCCCTGGAGAATATACAGAAATTCCAGAAAGATAATGAATTTCTTACAGAGCGCTTATTGACAATGGAAGAAGAAACAAAGATGCTGAAAGAAGCTTTGGCAAAACGTAACAGTGAATTGCAGGCTTCAAGGAGTATGTGTGCTAAAACACTTAGCAAACTTCAAATTTTGGAAGCACAAGTTTCGCCAAGTATTCATCAAAAGGGATCTCCAAAATCTACCACTCATATGAACCATGAAAGCATTTACAGTCAAAATACAGGTTATGCACCAAGCATGATCTCCATATCGGAAGATGGCAACGATGATGCAAGAAGCTGTGCTGAGTCTTGGTCTACAGCATTAATCTCTGAGCTATCCCAATTCACAAAGGAAAAGAATGCTGATGAATTGGGCAAATCTGAAGCGACTGAGAAGTTGGAACTGATGGATGACTTTCTAGAGGTCGAGAAATTTGCTGGATTATCAAATGATTCTATTGAAGACGCTTCTGCGTCATTTACTTCAAACAATAACACGGAAGAAATTGTGACCAATGAGGTATCCGAAGTTTGTACTAGCAAAGATGATCCCTCCGAGTCTGAAAAGAACAATGATTTGAATCCGTTGGTAATTCAAGTGTCCCCTGCTGCAGTATCACCCAGTTCCGGTGGGATTGATGGCTTATCACCAGCAGAACTTCAATCAAGAATACAATCAGTTTTTGAGTCCGTGGCTAAGGATGCTGATGTGAGTCAGATACTGAAGGATATTAAACGCGTTCTTGAAGACGCGCATGATACATCCATCCAAGACTCTGCAGCTGCCATTCCCCTCGAGGCCCCACCTTCTGATATTCCATGTGATAAAAAGGATAATTCTGAAGATGCTGGTTCAGTCGCAGAAAAAGAACTCATTTCTTCCCAAGAACCTTCTCAATATATACAGATAACTTCTGATATAGAAGCTGCAATTTCTCAAATTCATGACTTTGTATTGTTCCTAGACAGAGAAGCAATGACAGTTCATGATATATCTTCTGGTGGAGATGGGATAAGCCAAAAGATGGAGGAGTTCTGTGTTACTTACAATAAAGTTAAATGCCATGAAGCAAGTTTACTGCAGTTTGTTCTTGATCTGTCTCATGTATTGGCTAAAACAAGTGAATTCAGATTTAATATACTTGGTTATAAAGGTATGGAAACTGAAACTAACAGTCCTGATTGCATAGATAAGATTGCTCTGCCTGAAAATAAGTTAGTTCAAGACAATTCGTCGGAAGAGAGATATCAAAATGGTGATTCCCGTATTCTTAATCCCTGTTCTAATCCCGAGGTTCCAGATGATGGAAATTTGACCTCAAGCTATGAATCAAATGCCGCATCACAAAAATTCTCCATGGAGGAATTTGAGGAATTGAAATTAGAGAAAGAGAAGGCAATTGTGGATCTGTCGAAGTATTCGGAAAACCTTGAAATGACAAAGTCTCAGTTGCAAGAGACGGAACAACTTCTAGCTGAAGCTAAATCGCAACTGGCTTCTGCTCAAAGGTCAAACAGCTTAGGTGAGACTCAACTAAAATGCATGGCAGAGTCGTACAGATCACTTGAAACACGTGCACAGGAGTTTGAGACTGAGCTCAACCATCTGAGAAAGAAGATAGAAACTCTTGAGAGCGAACTTAAAGATGAAAAGAGATCTCATGAAGCAACTTTGGCGAAGTGCGCGGAGCTAGAAGAACAACTGCAAAGGAATGAGAGCTCAGCTGCTGATAATGAACTTAAGACTAAAAAGGAGAGAGACTTGGCTTCTGCTGCTGAAAAACTAGCCGAGTGTCAAGAAACAATATATCTTCTTGGCAAGCAGCTAAAAGCAATGCATCCTCAAACAGAACCAGTGGGATCTACGTACGGTGAGAGGTCTCACCTTTCGAAGGTTGAAGGTTTCGCAGAGCATGAAGTTCAGAGCCCAAATATGCAAGATCTGGATCAAGTTGAGATGGACGGTGCTAGTTTTGCTTTTATGCAAAGACAGGGTGCAGAGTCCCCTTTGCATTTTACTAACAGTTTATATAGTCCATCAGATAATGACTCAAACTTTCAAGTCATATCTCCTTTACCGCATCCAACTCACAAGCCTACAAAGTCGACCTCTTCGTCAGCTTCTTCGACTCCCACACCAGAAAAACATGGACGGGGTTTTAGTAGATTCTTTTCATCAAAAGCAAAAGTTGGCCATTAA 3252 0.4105 MDRRWPWKKKSSDKTVLEKVAAELDSAGASNQENQDVYKKPKYVQISVESYSHLTGLEDQVKTYEEKVETLEDEIAELNEKLSAANTEITTKEGLVKQHAKVAEDAVSGWEKAEAEALALKNHLESVTLSKLTAEDQASQLDGALKECMRQIRNLKEEHELKIQEVALAKTKQLDKIKGEFEARIRNFEQELLRSAADNAALSRSLQERSNMLVKLSEEKAHAEAEIEHHKSNVESCEREINSLKYELHVISKELEIRNEEKNMSMRSAEAANKQHAEGVKKIAKLEAECQRLRGLVRKKLPGPAALAQMKLEVESLGRDYGETRLRKSPVKPASSHFSPVPDFSLENIQKFQKDNEFLTERLLTMEEETKMLKEALAKRNSELQASRSMCAKTLSKLQILEAQVSPSIHQKGSPKSTTHMNHESIYSQNTGYAPSMISISEDGNDDARSCAESWSTALISELSQFTKEKNADELGKSEATEKLELMDDFLEVEKFAGLSNDSIEDASASFTSNNNTEEIVTNEVSEVCTSKDDPSESEKNNDLNPLVIQVSPAAVSPSSGGIDGLSPAELQSRIQSVFESVAKDADVSQILKDIKRVLEDAHDTSIQDSAAAIPLEAPPSDIPCDKKDNSEDAGSVAEKELISSQEPSQYIQITSDIEAAISQIHDFVLFLDREAMTVHDISSGGDGISQKMEEFCVTYNKVKCHEASLLQFVLDLSHVLAKTSEFRFNILGYKGMETETNSPDCIDKIALPENKLVQDNSSEERYQNGDSRILNPCSNPEVPDDGNLTSSYESNAASQKFSMEEFEELKLEKEKAIVDLSKYSENLEMTKSQLQETEQLLAEAKSQLASAQRSNSLGETQLKCMAESYRSLETRAQEFETELNHLRKKIETLESELKDEKRSHEATLAKCAELEEQLQRNESSAADNELKTKKERDLASAAEKLAECQETIYLLGKQLKAMHPQTEPVGSTYGERSHLSKVEGFAEHEVQSPNMQDLDQVEMDGASFAFMQRQGAESPLHFTNSLYSPSDNDSNFQVISPLPHPTHKPTKSTSSSASSTPTPEKHGRGFSRFFSSKAKVGH 1083
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g05894 1083 MobiDBLite consensus disorder prediction 610 635 - -
Vivi4g05894 1083 Coils Coil 54 95 - -
Vivi4g05894 1083 SUPERFAMILY Tropomyosin 801 963 - -
Vivi4g05894 1083 Coils Coil 349 376 - -
Vivi4g05894 1083 MobiDBLite consensus disorder prediction 760 795 - -
Vivi4g05894 1083 MobiDBLite consensus disorder prediction 1034 1066 - -
Vivi4g05894 1083 Coils Coil 138 172 - -
Vivi4g05894 1083 MobiDBLite consensus disorder prediction 1034 1083 - -
Vivi4g05894 1083 Coils Coil 206 289 - -
Vivi4g05894 1083 Coils Coil 863 952 - -
Vivi4g05894 1083 PANTHER FILAMENT-LIKE PLANT PROTEIN 4 1 1078 - -
Vivi4g05894 1083 MobiDBLite consensus disorder prediction 760 776 - -
Vivi4g05894 1083 Coils Coil 807 855 - -
Vivi4g05894 1083 Pfam Filament-like plant protein, long coiled-coil 92 969 IPR008587 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g05894 Vivi-Chr4 195843199 195848708 Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi4g05894 4 195843199 195848708 Vivi4g05894 4 195843199 195848708 ECH
Vivi4g05894 4 195843199 195848708 Vivi3g00580 3 9563297 9568334 PCT