Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g05879 ATGGAAGGTTTTGATCAAAGAGGTGGTGGTGGTAGTAGTAATCAAAAAAATATTCATGCATTTAGTTCTTCTTCCTTAGCTTCATCATCCACCAAACCCCCAATTCAGTTGAATTCTATGCCTATCAATCAAATTAATCAAATGGGTTTTCCTGAAAATCAAAAAAGTTATAGTATTGGTATACCACCTTCACACCCTAATACCAATACCACTTTATCACCTAAACTTTCATCATCCCCTTATTCCCAGTTTATGTCTTCTCCACAATCCCAAACCCATTCTAGGTCTTTGTCTCAGCCCACTTTTCTCTCTCTAGATTCCTTTTCGTTGCCTCCATTGAGTCCTTCACTTTATCCTTTGAGTCCAAACCCTTTTTCGGACTCGGGTTCGAAAGATGTTTCTATGGAGGAAAACTTGGCTGTCTCTCATGCTCCTTCGCCTAACCGCGGTCATGCTGTTCAGCATGGGCATTGTCTTCCACCTCGTAAAGGGCATAGGCGATCTAGCAGTGATACGCCTTTAGGGATCTCGGAATTCGTTAACTCTGCTCCTCAGTTGGGGAGTGATCGTAGGAATTTGGTTTCTGGAGGGGAGAAATTTGGTTCTGAGAAGCCGATTCAGTTGGTGTTGAAGGATAGGAACAGTCTTGATGGATTTGGAAGAGAGAGTTTTAATGGGAGGAAGGAGGATGATGCGGCTGCAATGGATGATTTGTTTAGTGCCTACATGAATTTGGAGAATATGAATAATATGAGTTTTTCTGGTATGGAAGATAGCCGAACTAGTGGTTCGAAGACGGTTGAAAGCAGTGATAATGAAGTTGAGAGTCATGTTAAAGGAATCGGTTCTAAGGGTGCGAGTTCAAGCTGTTCGGATGAGAGGAGGGAAGGAATCAAGCGGAGTTCTAATGGAGATATTGTATCTGCTACTCGACATAGGAGAAGTTTCTCATTGGATGGTTCCATGGGAAATTTTTATATTGAAGATGGATCGCCTAAGCTTCCTCCTTTACAAGGTCGAGCTGGTCGACACTCGCCTAGCAATTCAATGGACAGTAGTAAAACAGCAGAAATTGGGATGGAGTTTGGAAAGGGTGAGTTCAGCTCCGAGGAGATGAAGAAAATAATGGAAAATGATAAACTTGCTGAAATTGCCGTGTCTGATCCCAAGCGTGCAAAGAGGATTTTGGCCAATCGTCTATCAGCTGCTCGCTCTAAAGAGCGGAAGACGAAATATATTTCTGAATTGGAGCACAAGGTCCAAACTCTTCAGACAGAGACTACTACATTGTCTACTCAGTATACCAAATTACAGATGGATTATTCAGAGCTTAAAAATGAGCATAACGAGTACAAATTGAGGCTTCAATCCTTGGAACAACAATCCCAACTGAAAGATGCTCTGAACGAGACTTTGGATGCTGAAGTCCGACGCTTAAGACGCACTGTGGCAGATCTTGGCGGAGAGTCCCTCCTCTCTAGTCTCATGACTCGGCAGCTAGTTATTAACCAGCAGCAGATGCTCCAGTCACAGCAACAGCAGCCAAACCAGCTTAGAAATTTCCAACCGCAAAACAGCCAATCTCAGGAAGAAACACAGACTCAGATGCAGCAGAATATTCAACGCAATCATGAATTCCAAACCCAGCATCAGAATGGCAAAACTACTGCATAG 1674 0.4301 MEGFDQRGGGGSSNQKNIHAFSSSSLASSSTKPPIQLNSMPINQINQMGFPENQKSYSIGIPPSHPNTNTTLSPKLSSSPYSQFMSSPQSQTHSRSLSQPTFLSLDSFSLPPLSPSLYPLSPNPFSDSGSKDVSMEENLAVSHAPSPNRGHAVQHGHCLPPRKGHRRSSSDTPLGISEFVNSAPQLGSDRRNLVSGGEKFGSEKPIQLVLKDRNSLDGFGRESFNGRKEDDAAAMDDLFSAYMNLENMNNMSFSGMEDSRTSGSKTVESSDNEVESHVKGIGSKGASSSCSDERREGIKRSSNGDIVSATRHRRSFSLDGSMGNFYIEDGSPKLPPLQGRAGRHSPSNSMDSSKTAEIGMEFGKGEFSSEEMKKIMENDKLAEIAVSDPKRAKRILANRLSAARSKERKTKYISELEHKVQTLQTETTTLSTQYTKLQMDYSELKNEHNEYKLRLQSLEQQSQLKDALNETLDAEVRRLRRTVADLGGESLLSSLMTRQLVINQQQMLQSQQQQPNQLRNFQPQNSQSQEETQTQMQQNIQRNHEFQTQHQNGKTTA 557
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g05879 557 Gene3D - 389 446 - -
Vivi4g05879 557 MobiDBLite consensus disorder prediction 330 353 - -
Vivi4g05879 557 SUPERFAMILY Leucine zipper domain 390 446 IPR046347 GO:0003700|GO:0006355
Vivi4g05879 557 MobiDBLite consensus disorder prediction 511 557 - -
Vivi4g05879 557 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 85 543 - -
Vivi4g05879 557 Coils Coil 406 426 - -
Vivi4g05879 557 Coils Coil 434 489 - -
Vivi4g05879 557 Pfam bZIP transcription factor 390 447 IPR004827 GO:0003700|GO:0006355
Vivi4g05879 557 MobiDBLite consensus disorder prediction 8 99 - -
Vivi4g05879 557 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 388 451 IPR004827 GO:0003700|GO:0006355
Vivi4g05879 557 MobiDBLite consensus disorder prediction 142 180 - -
Vivi4g05879 557 SMART brlzneu 386 450 IPR004827 GO:0003700|GO:0006355
Vivi4g05879 557 CDD bZIP_plant_RF2 391 463 IPR044759 GO:0003700|GO:0006355
Vivi4g05879 557 MobiDBLite consensus disorder prediction 1 99 - -
Vivi4g05879 557 MobiDBLite consensus disorder prediction 255 306 - -
Vivi4g05879 557 MobiDBLite consensus disorder prediction 255 269 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g05879 Vivi-Chr4 195567104 195570750 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Vivi4g05879 bZIP_1 1.5e-11 CL0018