Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g05852 ATGGCAGCAGAAAATGAGGTGATCGGTGTTCATTCCGTTGAATCATGGAAGGAACAGATCCAGAAGGGAACCGAATCCAAAAAACTGATTGTGGTGGATTTTACTGCTTCGTGGTGTGGTCCATGCCGTTTTATTGCTCCAATTCTAGCCGAGATTGCTAAGAAGACACCTGAAGTTATCTTCCTTAAGGTGGACATCGACGAATTAAAGAGTGTTGCCGAGGAATGGTCTGTCGAGGCTATGCCAACCTTCTTGTTCTTGAAAGAAGGCAAGGAAGTGGACAAGGTAGTTGGTGCTAAGAAAGAAGAGCTGCAGCTGGCAATAACCAAGCATGCAACAGCTGTTGCTACTGCTTGA 357 0.4566 MAAENEVIGVHSVESWKEQIQKGTESKKLIVVDFTASWCGPCRFIAPILAEIAKKTPEVIFLKVDIDELKSVAEEWSVEAMPTFLFLKEGKEVDKVVGAKKEELQLAITKHATAVATA 118
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g05852 118 SUPERFAMILY Thioredoxin-like 5 112 IPR036249 -
Vivi4g05852 118 PRINTS Thioredoxin family signature 77 88 - -
Vivi4g05852 118 PRINTS Thioredoxin family signature 38 47 - -
Vivi4g05852 118 PRINTS Thioredoxin family signature 30 38 - -
Vivi4g05852 118 NCBIfam thioredoxin 21 110 IPR005746 GO:0015035
Vivi4g05852 118 ProSitePatterns Thioredoxin family active site. 31 49 IPR017937 -
Vivi4g05852 118 FunFam Thioredoxin 6 113 - -
Vivi4g05852 118 Gene3D Glutaredoxin 1 117 - -
Vivi4g05852 118 Pfam Thioredoxin 10 108 IPR013766 -
Vivi4g05852 118 PANTHER THIOREDOXIN 7 110 - -
Vivi4g05852 118 CDD TRX_family 18 108 - -
Vivi4g05852 118 ProSiteProfiles Thioredoxin domain profile. 1 113 IPR013766 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Vivi4g05852 Vivi-Chr4 195041409 195043156 Wgd
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi4g05852 4 195041409 195043156 Vivi4g05852 4 195041409 195043156 ECH
Vivi4g05852 4 195041409 195043156 Vivi3g00524 3 8853711 8855075 PCT