Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g05851 ATGGAAACCATCTCAGTTTCCAAGTTTCTTCTTTTACTTTTCTTCTCTCTCTTCTTTCTTGGTTCTCAGTTTGCTCATTCTAGTGTTACATATGATAGAAAAGCTATCATCATTAATGGACAAAGAAGAATACTTATTTCTGGTTCCATTCACTACCCAAGAAGCACCCCTGAAATGTGGGAGGATCTGATTCAGAAAGCAAAAGATGGAGGGTTGGATGTTATTGACACTTATGTGTTTTGGAATGTTCATGAACCTTCTCCTAGTAATTACAATTTTGAAGGAAGGTACGATCTGGTACGGTTCATTAAGACTGTTCAGAAAGTGGGTCTCTATGTGCATCTTAGGATTGGTCCTTATGTATGTGCTGAATGGAACTTTGGAGGTTTTCCTGTTTGGTTGAAGTATGTTCCTGGGATCAGTTTTAGAACAGATAATGGTCCTTTTAAGGCTGCAATGCAAGGTTTTACTCAGAAGATTGTTCAGATGATGAAGAATGAAAAGTTGTTTCAGTCTCAAGGTGGACCAATTATTCTTTCGCAGATTGAGAATGAGTATGGACCGCAAGGAAGAGTACTTGGAGCTTCTGGTCATGCATACTCAAATTGGGCTGCAAAGATGGCTGTTGGATTAGGTACCGGTGTCCCTTGGGTGATGTGTAAGGAAGATGATGCTCCAGATCCGGTGATAAATACTTGCAATGGTTTTTACTGTGATTATTTCTCGCCCAATAAACCATACAAGCCTAAACTCTGGACTGAGTCTTGGACTGGCTGGTTTTCGGAATTCGGTGGACCTGTTCCTCAGCGACCGGTTCAGGATCTAGCGTTTGCAGTTGCTCGTTTCTTACAAACGGGTGGTTCATTTTTTAATTATTACATGTATCACGGAGGAACTAATTTCGGACGATCAGCTGGAGGACCATTCATAACTACGAGCTATGACTATGATGCTCCAATTGATGAATACGGTTTGTTAAGGGAACCTAAATATGGTCATTTGACGGATCTTCATCAAGCTATCAAACAATGTGAACATGCTTTGGTTTCTTCGGATCCTACTGTTACATCATTAGGAACATACGAACAGGCACATGTATTCTCTTCAGGAACGACGTGTGCAGCTTTTCTAGCAAACTATCATTCGAATTCGGCTGCAAGAGTGACATTCAATAATCGGCACTATGATTTACCTCCTTGGTCCATTAGCATCCTCCCTGATTGTAGAACTGATGTATTCAACACTGCAAGAGTGAGGTTTAAACCTTCACAAATACAAATGTTCCCTAGCAATTCTAAGTTGTTATCATGGGAAACCTATGACGAAGATGTATCGTCTCTAGCGGAAAGTGCCAGAATTACAGCTTCTGGACTTCTAGATCAGATAAGTGCTACTCGAGACACTAGTGACTATCTTTGGTACATAACCAGCGTAGACATAAGTTCATCAGAATCATTTCTTCGCGGAAGGAACAAGCCTAGCATTAGTGTGCATTCCTCTGGCGATGCCGTTCATGTGTTTATCAATGGAAAATTTTCAGGCTCAGCTTTTGGGACAAGAGAGCAGAGAAGTTGCACGTTTGACGGCCCTATCGACCTACGTGCTGGAACTAATAAAATCGCACTTCTCAGTGTAGCTGTTGGATTACCTAATGGGGGAATCCATTACGAATCATGGAAGACAGGAATCACCGGTCCAGTTTTACTCAAAGGTCTCGATCACGGCCAGAAAGATTTGACAGGGCAGAAATGGTCATACCAGGTCGGCCTAAAAGGCGAAACGATGAATTTGGTGTCTCCTAATGGTGTATCATCTGTTGATTGGGTTAGAGAATCATTAGCTTCACAAAACCAGCCACAGTTGAAATGGCACAAGGCCTATTTCAATGCACCTAATGGTAATGAACCATTGGCATTGGACATGAGCAGTATGGGAAAGGGTCAAGTATGGATCAATGGACAAAGCATAGGAAGATATTGGATGGTTTACGCAAAGGGTAACTGCAATTCTTGCAACTACGCTGGAACGTATCGTCAGGCGAAGTGCCAGCTCGGTTGCGGACAACCTACTCAACGATGGTACCATGTTCCACGGTCATGGTTAAAGCCGACAAATAATTTGATGGTAGTTTTTGAGGAATTAGGAGGGAATCCTTGGAAAATATCTCTGGTAAAGAGGTTAATACATACTCCAAGAACTAGTGAATCAAATTTAATGTCTAATACAACACGAGTATGA 2238 0.4169 METISVSKFLLLLFFSLFFLGSQFAHSSVTYDRKAIIINGQRRILISGSIHYPRSTPEMWEDLIQKAKDGGLDVIDTYVFWNVHEPSPSNYNFEGRYDLVRFIKTVQKVGLYVHLRIGPYVCAEWNFGGFPVWLKYVPGISFRTDNGPFKAAMQGFTQKIVQMMKNEKLFQSQGGPIILSQIENEYGPQGRVLGASGHAYSNWAAKMAVGLGTGVPWVMCKEDDAPDPVINTCNGFYCDYFSPNKPYKPKLWTESWTGWFSEFGGPVPQRPVQDLAFAVARFLQTGGSFFNYYMYHGGTNFGRSAGGPFITTSYDYDAPIDEYGLLREPKYGHLTDLHQAIKQCEHALVSSDPTVTSLGTYEQAHVFSSGTTCAAFLANYHSNSAARVTFNNRHYDLPPWSISILPDCRTDVFNTARVRFKPSQIQMFPSNSKLLSWETYDEDVSSLAESARITASGLLDQISATRDTSDYLWYITSVDISSSESFLRGRNKPSISVHSSGDAVHVFINGKFSGSAFGTREQRSCTFDGPIDLRAGTNKIALLSVAVGLPNGGIHYESWKTGITGPVLLKGLDHGQKDLTGQKWSYQVGLKGETMNLVSPNGVSSVDWVRESLASQNQPQLKWHKAYFNAPNGNEPLALDMSSMGKGQVWINGQSIGRYWMVYAKGNCNSCNYAGTYRQAKCQLGCGQPTQRWYHVPRSWLKPTNNLMVVFEELGGNPWKISLVKRLIHTPRTSESNLMSNTTRV 745
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g05851 745 ProSitePatterns Glycosyl hydrolases family 35 putative active site. 174 186 IPR019801 GO:0004553|GO:0005975
Vivi4g05851 745 Pfam Glycosyl hydrolases family 35 36 340 IPR031330 -
Vivi4g05851 745 SUPERFAMILY Galactose-binding domain-like 583 733 IPR008979 -
Vivi4g05851 745 Gene3D - 443 584 - -
Vivi4g05851 745 SUPERFAMILY Galactose-binding domain-like 402 573 IPR008979 -
Vivi4g05851 745 FunFam Beta-galactosidase 591 731 - -
Vivi4g05851 745 PANTHER BETA-GALACTOSIDASE RELATED 20 731 IPR001944 GO:0004553|GO:0005975
Vivi4g05851 745 Gene3D - 594 732 - -
Vivi4g05851 745 Gene3D - 293 415 - -
Vivi4g05851 745 FunFam Beta-galactosidase 24 344 - -
Vivi4g05851 745 PRINTS Glycosyl hydrolase family 35 signature 619 633 IPR001944 GO:0004553|GO:0005975
Vivi4g05851 745 PRINTS Glycosyl hydrolase family 35 signature 172 187 IPR001944 GO:0004553|GO:0005975
Vivi4g05851 745 PRINTS Glycosyl hydrolase family 35 signature 251 266 IPR001944 GO:0004553|GO:0005975
Vivi4g05851 745 PRINTS Glycosyl hydrolase family 35 signature 646 662 IPR001944 GO:0004553|GO:0005975
Vivi4g05851 745 PRINTS Glycosyl hydrolase family 35 signature 308 324 IPR001944 GO:0004553|GO:0005975
Vivi4g05851 745 PRINTS Glycosyl hydrolase family 35 signature 39 56 IPR001944 GO:0004553|GO:0005975
Vivi4g05851 745 PRINTS Glycosyl hydrolase family 35 signature 115 134 IPR001944 GO:0004553|GO:0005975
Vivi4g05851 745 PRINTS Glycosyl hydrolase family 35 signature 60 78 IPR001944 GO:0004553|GO:0005975
Vivi4g05851 745 PRINTS Glycosyl hydrolase family 35 signature 288 303 IPR001944 GO:0004553|GO:0005975
Vivi4g05851 745 FunFam Beta-galactosidase 446 583 - -
Vivi4g05851 745 Pfam Beta-sandwich domain in beta galactosidase 348 418 IPR041392 -
Vivi4g05851 745 SUPERFAMILY (Trans)glycosidases 27 345 IPR017853 -
Vivi4g05851 745 FunFam Beta-galactosidase 293 420 - -
Vivi4g05851 745 Gene3D Glycosidases 21 292 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g05851 Vivi-Chr4 195037066 195041329 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi4g05851 4 195037066 195041329 Vivi4g05851 4 195037066 195041329 ECH
Vivi4g05851 4 195037066 195041329 Vivi3g00517 3 8822254 8826644 PCT