Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g05838 ATGGGTTCAGCTTGTTGTGTTGCTGCAAAGGATCGTAGTGATAGTACTAATAGAATTGAAAGAGAAAGTTTGCATAGAGATGTCGCATGTTCACCGTCATGGAGCTTTAGATGGGATAGTCGAGGGCGTGTTGCTGGTGAAGTTCAGAATCCTTCCTATCACTCATCTCATGCAGTTAGTAGAAATATCAGCATGGAGTTTAAAGGCTCGTTAAGTTCTTACAGAAGTAATTTATCTGATGGGGGAAGCGTCTTGGACAATTCTGCAACTCCTGTTTCTCTGAAGTCACCTGTCAATGAGGCATTGGCTGGAAACATAATGACACCATCTTCTGATCTCTCCATGTCAAGCAATTTTTCTACAGTGGTGAAGAATCCAGGAGAATCTTCAATACCGAATCATTCCTTTTCAATACCTTCAGTTTTATCAACACCTATATCAGGTCCGTTATATAATCATGATCATCATCATCCCAACTCTACCCCAACAAGATGGGCACATCGATCTCTAAGAAACCCACTGTTGAGGCAGATTTCTGATAATCAGATCATGGGTCTAAAATCACCAGACAGCTCAATTTTTGAAGGGAGGGTATCATTTGTACTCTCCGCTTGCAGCAATGAAATTGAAGCTATATCCCAATGTGGATCTTCTGATGGCTGGTCAATGCACACCTTTTCTGAGCTGGTGGCCTCGCAAAGAGGAAGGTGGTCTTTTGACAGTGAATGTTTAGGCTCGGGTCGTCGAAAGATTAGTGGATCAAGTAGCAGGTTGTCATATTCACCATCCATGGATCTACAATCTTGTGGAGCTTGCACAAGGCTTTTGTCTGACAAATCAGCATGGAGCAACCAGAAGTTCGTTGCCAACAGTGATCTCTCCGTTGTAGCTGTACTAATATGCGGTCACACATTTCATGCAGAATGTTTAGAGACTATGACTGCAGAGGCAGATAAGTATGATCCATCGTGTCCAATTTGTATGGTTGGTGATAAGCACTTTTCAAAGTTGTCCAGAAAATGTTTACGGGCTGAAGCAGAGATGAAGGCCAAGAACCACAAGATATCCAGAAATCGTGTAGTTGATAGCTACCTTGATGGTGGTTTTGATGTATTTGATGGCCAAAAAGATATCGAACTGGGAGGAAAAGTTTCAAAGATGGAGGCTAGCTCCAGTACGAGGAGCTCAATTGGAAAGCCTTTTTTGAGGAGGCATTTTTCAAATGGGTCAAAGTGTAGCCGGTCTCTGTCTGAGAATGATTCTCCGAGGAAGAAAAGCTTTTGGGCAAGATATAGAAAAGATTGA 1305 0.4238 MGSACCVAAKDRSDSTNRIERESLHRDVACSPSWSFRWDSRGRVAGEVQNPSYHSSHAVSRNISMEFKGSLSSYRSNLSDGGSVLDNSATPVSLKSPVNEALAGNIMTPSSDLSMSSNFSTVVKNPGESSIPNHSFSIPSVLSTPISGPLYNHDHHHPNSTPTRWAHRSLRNPLLRQISDNQIMGLKSPDSSIFEGRVSFVLSACSNEIEAISQCGSSDGWSMHTFSELVASQRGRWSFDSECLGSGRRKISGSSSRLSYSPSMDLQSCGACTRLLSDKSAWSNQKFVANSDLSVVAVLICGHTFHAECLETMTAEADKYDPSCPICMVGDKHFSKLSRKCLRAEAEMKAKNHKISRNRVVDSYLDGGFDVFDGQKDIELGGKVSKMEASSSTRSSIGKPFLRRHFSNGSKCSRSLSENDSPRKKSFWARYRKD 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g05838 434 PANTHER EXPRESSED PROTEIN 1 332 - -
Vivi4g05838 434 SUPERFAMILY RING/U-box 268 328 - -
Vivi4g05838 434 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 249 329 IPR013083 -
Vivi4g05838 434 ProSiteProfiles Zinc finger RING-type profile. 269 327 IPR001841 -
Vivi4g05838 434 MobiDBLite consensus disorder prediction 409 434 - -
Vivi4g05838 434 MobiDBLite consensus disorder prediction 417 434 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g05838 Vivi-Chr4 194873550 194877146 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi4g05838 4 194873550 194877146 Vivi4g05838 4 194873550 194877146 ECH