Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g05834 ATGTCAGGTCCTCTTGATCGCTTCGCTCGTCCATGTTTTGAAGGTTTTTCTGGTCATCATGACGAAAGAAGGGAGCGGAAATCGGATTTTGAGAATTCGGAAGACGATAGGAGGACCAGAATTGGGAGTTTGAAAAAGAAAGCGATTAATGCTTCGAGTAAGTTTCGGCATTCTCTTAGGAAGAAAAGCCGGAGAAAGAATGCGAGCCGGAGTAATTCGCTCGCCATTGAGGATGTTCGAGATGTTAAGGAGCTGCAAGCTGTGGATGCTTTTCGACATTTTCTTATTTTGGAGAATTTGTTGCCGCCAAGACATGATGACTATCATACTTTATTGAGATTCTTGAAAGCAAGAAAGTTTGACGTCGAGAAGGCAAAGCACATGTGGGCTAACATGATCCAATGGAGGAAAGAGTATGGTACTGATTCAATTATGGAGGATTTTGAGTTCAGTGAGTTTGATGAAGTCCTACAATACTATCCACATGGTTATCACGGCGTTGATAAGGAAGGAAGACCTATTTATATTGAGAGGCTAGGTAAAGTTGATCCCAATAAGCTTATGCAAGTAACTACCATGGAAAGGTATTTAAAATACCATGTACAGGGTTTTGAGAAAACGTTTGCTGTTAAGTTTCCTGCTTGTTCTATTGCTGCAAAGAGACACATAGATTCAAGTACAACCATTTTGGATGTTCATGGTGTGGGTTTCAAAAACTTCTCAAAGACTGCAAGGGATCTCATCATGCGGCTGCAGAAAATTGATGGTGACTACTATCCCGAAACATTATGCCGAATGTTCATAATCAATGCTGGACCTGGTTTCAAGCTTCTTTGGAACACAGTGAAAACATTTCTTGATCCCAAAACTAGTTCAAAGATAAATGTTCTTGGAAACAAGTTCCAGAATAAGTTATTTGAAATTATAGATGTCAGTGAGCTGCCAGATTTTCTTGGTGGTAGTTGTACTTGCGCAGAACAAGGCGGTTGTATGAGGTCTGATAAAGGACCATGGCAAGATCCAAACATTATGAAGATGGTTCTAAATGGGGAAATACAATGTTCTAGACAAATAGTAACTGTTACTAATGATGAGGGGCGAGTAATTGAATGTGATAAGGTGTCTTATCCAATGATAAGAAGTAGTGATACATCAACAGCCGAATCAGGATCTGAAGTTGAAGATATCACTTCCCCCAAAGCAAGTGGGAATTATACAAACCCAAGGTTGACTCCTGTCCATGAAGAAGCAAGGTTGGCTGGTAGGGCTGGTCTTTCTTCCGGTTTCTCTGAGTATGATGAGTACGTTCCCATGGTTGACAAGACTGTTGATGTTGCATGGAAGGAGAAACAAGTGACAACTCATAACTCATATGGCACAACAGAAAAATTCCTATTGAAGACTAGAGGATCGGATGGAAAGCGTACATATATCTGGGCTATTATCATTGGCTTCTTTGTTGCCATTGTTACTTTTGCCCGCTCAATAACATTTCGTATGACTAAGGGAATAAAAGACAATGAATCTGACTGTGTCCAAAATATGCCTAACATGTCGGTTAGTGCCGAAACAATAACCAAGGAGGAATCTCGTCCCCCATCACCTGCTCCCAGATCATCAGAGGAAGAACATGTCTCATCTACTTTGAAACGCCTTTGTGATCTTGAAGAGAAGGTTGAAATGCTGCAGTCAAAACCTAATGTAATGCCATGTGAAAAAGAGGAGCTTCTGAATGCCGCTGTTTATCGCGTGGATGCATTGGAAGCTGAATTGATCACTACAAAGAAGGCTTTATACGAAGCTCTGATTAGACAAGAAGAACTAATGGCATACATAGACAGTCAGGAGAGAAGAAAATTTGAGAAAAAGAAATTTTGCTGGTGA 1884 0.4055 MSGPLDRFARPCFEGFSGHHDERRERKSDFENSEDDRRTRIGSLKKKAINASSKFRHSLRKKSRRKNASRSNSLAIEDVRDVKELQAVDAFRHFLILENLLPPRHDDYHTLLRFLKARKFDVEKAKHMWANMIQWRKEYGTDSIMEDFEFSEFDEVLQYYPHGYHGVDKEGRPIYIERLGKVDPNKLMQVTTMERYLKYHVQGFEKTFAVKFPACSIAAKRHIDSSTTILDVHGVGFKNFSKTARDLIMRLQKIDGDYYPETLCRMFIINAGPGFKLLWNTVKTFLDPKTSSKINVLGNKFQNKLFEIIDVSELPDFLGGSCTCAEQGGCMRSDKGPWQDPNIMKMVLNGEIQCSRQIVTVTNDEGRVIECDKVSYPMIRSSDTSTAESGSEVEDITSPKASGNYTNPRLTPVHEEARLAGRAGLSSGFSEYDEYVPMVDKTVDVAWKEKQVTTHNSYGTTEKFLLKTRGSDGKRTYIWAIIIGFFVAIVTFARSITFRMTKGIKDNESDCVQNMPNMSVSAETITKEESRPPSPAPRSSEEEHVSSTLKRLCDLEEKVEMLQSKPNVMPCEKEELLNAAVYRVDALEAELITTKKALYEALIRQEELMAYIDSQERRKFEKKKFCW 627
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g05834 627 SUPERFAMILY CRAL/TRIO domain 152 346 IPR036865 -
Vivi4g05834 627 MobiDBLite consensus disorder prediction 522 547 - -
Vivi4g05834 627 Gene3D - 31 139 - -
Vivi4g05834 627 SMART sec14_4 152 323 IPR001251 -
Vivi4g05834 627 Pfam CRAL/TRIO domain 158 320 IPR001251 -
Vivi4g05834 627 SUPERFAMILY CRAL/TRIO N-terminal domain 83 148 IPR036273 -
Vivi4g05834 627 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 152 326 IPR001251 -
Vivi4g05834 627 FunFam SEC14 cytosolic factor 140 352 - -
Vivi4g05834 627 Pfam CRAL/TRIO, N-terminal domain 104 131 IPR011074 -
Vivi4g05834 627 PRINTS Cellular retinaldehyde-binding protein signature 279 298 - -
Vivi4g05834 627 PRINTS Cellular retinaldehyde-binding protein signature 110 132 - -
Vivi4g05834 627 PANTHER CRAL-TRIO DOMAIN-CONTAINING PROTEIN YKL091C-RELATED 25 615 - -
Vivi4g05834 627 SMART CRAL_TRIO_N_2 107 132 IPR011074 -
Vivi4g05834 627 MobiDBLite consensus disorder prediction 13 43 - -
Vivi4g05834 627 MobiDBLite consensus disorder prediction 1 43 - -
Vivi4g05834 627 Gene3D - 140 351 IPR036865 -
Vivi4g05834 627 MobiDBLite consensus disorder prediction 381 409 - -
Vivi4g05834 627 CDD SEC14 153 320 IPR001251 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g05834 Vivi-Chr4 194786807 194791335 Dispersed/Wgd