Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g05803 ATGTCAGTCACCACCGCAACTATGAACAAAGACGACGGCACTGCCGTCACCGCCGATAGGGCAAGAATTCTCTCCCCAGATTTTGTCCACACCTTGAAACTCAAATACCTAAAGTTAGGTTATCCCTACTTAATCTCAAATCTCATAACCCTATCTTTAATTCCATTAGTCATCATCATCTTACTCAAAAAAGAAAACCTCAAAAAAGAAAATCTCACCCAACAAGGGTTTCTTCAGCACAATCTCATCCACATCTTCACTTTCTTCGGTTTCACAGTCTTTGCTTTCATTTTCCATATCCGCACGCGCCCACGCGCCGTCTACCTCATCGACTTCTCTTGTTTCCGTCCCGCCGATCACCTCAAAGCTCCGTTCCACAGCTTCATCCAGCATTCTCATCTCACCGGCGACTTTGACGATTCCTCTTTGGAGTTCCAGCGCAAGATTCTTCTCCGATCTGGTCTCGGCGATGAAACATACGTTCCCGAAGCCATGCATTGCATTCCTCCCCGTCCTTCAATCTATGCGGCTAGAAAGGAAGCGGAATCTGTCATGTTTGGTGCGTTGGATAATCTTTTCATCAACACAAACCTAAATCCGAAAGAAATTGGAATTCTGGTTGTGAATTGTAGTTTGTTTAACCCTATACCTTCACTTTCTTCAATGATTGTGAATAAATATAAACTGAGAAGTAACATTATGAGTTTCAATTTAGCTGGAATGGGTTGCAGTGCTGGTGTTATAGCTACTGATCTTGCAAGAGATCTGTTGATGGTTCAAAAGAATGATACTTATGCTGTTGTTGTCAGCACTGAAAATATCACTCAGAATTGGTACTTTGGGAATAACAAATCAATGCTTATACCTAATTGTTTGTTTAGAGTTGGTTGTTCGGCTGTGTTGCTATCGAATAAATCCTTTGATAGAACGAGGGCTAAGTATAAGCTTGTGCATGTTGTGAGGACGAATTGCGGTGCAGACGATAAGGCCTTTCGATGTGTTTATCAGGAAGAAGATGCTGTGGGGAAAACTGGTGTCTCATTGTCGAAAGACTTGATGGAAATTGCTGGTTTGGCATTGAAAATAAATATTACTACACTTGGTCCTTTGGTGCTTCCGATTAGTGAGCAACTTATGATTTTCGCTAATTTGGTTTTGAAAAAGTTTTCTAATAACCCTGTGAAGCCTTATATACCAGATTTCAAACTCGCGTTTGACCATTTCTGTATACATGCTGGTGGAAGGGCTGTGATCGATGAGTTGGAGAAGAATCTTGAGTTGCTTCCCGTACACGTGGAGGCTTCTAGGATGACGCTTCATCGCTTTGGGAACACTTCCTCGAGCTCTATTTGGTATGAGTTGGCGTATATTGAAGCTAAAGGGAGGGTAAAGAAGGGAAACCGAGTCTGGCAAATTGCATTTGGAAGTGGTTTCAAGTGCAACAGTGCTGTTTGGGAGGCGATCCGTGATGTGAAGCCTTCTCCCAACGGACCATGGGAAGATTGCATTGATAAGTATCCTGTGGAACTACTCCCATAG 1539 0.4269 MSVTTATMNKDDGTAVTADRARILSPDFVHTLKLKYLKLGYPYLISNLITLSLIPLVIIILLKKENLKKENLTQQGFLQHNLIHIFTFFGFTVFAFIFHIRTRPRAVYLIDFSCFRPADHLKAPFHSFIQHSHLTGDFDDSSLEFQRKILLRSGLGDETYVPEAMHCIPPRPSIYAARKEAESVMFGALDNLFINTNLNPKEIGILVVNCSLFNPIPSLSSMIVNKYKLRSNIMSFNLAGMGCSAGVIATDLARDLLMVQKNDTYAVVVSTENITQNWYFGNNKSMLIPNCLFRVGCSAVLLSNKSFDRTRAKYKLVHVVRTNCGADDKAFRCVYQEEDAVGKTGVSLSKDLMEIAGLALKINITTLGPLVLPISEQLMIFANLVLKKFSNNPVKPYIPDFKLAFDHFCIHAGGRAVIDELEKNLELLPVHVEASRMTLHRFGNTSSSSIWYELAYIEAKGRVKKGNRVWQIAFGSGFKCNSAVWEAIRDVKPSPNGPWEDCIDKYPVELLP 512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g05803 512 PANTHER 3-KETOACYL-COA SYNTHASE 85 509 IPR012392 GO:0006633|GO:0016020|GO:0016747
Vivi4g05803 512 FunFam 3-ketoacyl-CoA synthase 117 487 - -
Vivi4g05803 512 SUPERFAMILY Thiolase-like 93 311 IPR016039 GO:0016746
Vivi4g05803 512 PIRSF Very_long_ch_3-ktacl-CoA_syn 27 511 IPR012392 GO:0006633|GO:0016020|GO:0016747
Vivi4g05803 512 Gene3D - 130 488 IPR016039 GO:0016746
Vivi4g05803 512 SUPERFAMILY Thiolase-like 317 487 IPR016039 GO:0016746
Vivi4g05803 512 CDD CHS_like 91 485 - -
Vivi4g05803 512 Pfam 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 405 486 IPR013747 -
Vivi4g05803 512 Pfam FAE1/Type III polyketide synthase-like protein 101 388 IPR013601 GO:0006633|GO:0016020|GO:0016747
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g05803 Vivi-Chr4 194435886 194437682 Proximal
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi4g05803 4 194435886 194437682 Vivi4g05803 4 194435886 194437682 ECH