Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g05699 ATGCTAAGAGGCGAAATCGTCGGTTCTAAAAGCGCGAGGCACACCGCCACCACCGCCACCGTATCTAACAAAGTTCTCGTGGCGGTTAAAGCGGACAAGGTGATCTCCAACACCGCGTTAGCATGGGCACTCACTCACATCGTTCATTCCAGTGACTCTATCACACTTCTCGCCGTTTATTCTACCGAAAAAACCGGTAGAAGATTCTGGAATTTCTCGAGACTTGCCGGAGATTGTTCGAATGGACGCGCGGGAAAGTCGCCGGAGCAGATTTCTGATATCTCTGAGTCTTGTGCTCAGATGGTTTTTCAGTTGCACAATCACATTGAGGTTAGGGTGAAGATTAAGGTTGTCACGGGATCTCCCAGTGGTGCTGTGGCGGCTGAAGCTAGATGGAGTGGTTCCCATTGGGTCATACTGGACAAGAAACTAAAGCAAGAGGTAAAACATTGCATGGATGAACTTAACTGTAGCATTGTGGTGATGAATGGATCACAGCCTAAAGTCCTCAGACTTAATTTAGGAGGACCCTCCGATGAACTCCAAACACCATTTTTCTCTACTTCCTCTTCACCAGGTCTAGAAATCAAAAAGCTAAATGGACGCAGATTGAAACATTCCACCCCAGTGGGTAGCCCTGAAGTAGCAGGCTCATCTGTTATAACCAATACTGGATTAGATTCAGTGTCAAGCTCAGACTCAATGACTTCTCCGTTTCTGGTCTATAAAGAAAACCCACTGTATAATGGCCAGGGACCTCGCAAAAGAACAAGCAAACCAATCAACAAGCCAAAAGATTTCAACTTCCAGCCACCATCATACTTTAATTTGGAAAGGGATAGCCCACCCCCTTCAAGGAAACTCCTAACATCATCTGTGGCTAGTGATAACAACACTGAAATTTGGATCTCTCAGAACCACATTAATAACGATAAGCTTCAAAGAGCTGAAAACAGAATGATTCAAAGAACTAAATCTCCAAATTCTAAAACTTTACTTGAGACTTTTTTACACTCTGATCAAGAGAAGAGAACAGATGAACTTGAGTTTAACAAAGCTCAAAGTGTAAGTTATGTCACCAGCTCAAGCATCAGAGATAGCCCTATTCCTTTGGGTAGAAATTCCTCTATACCTCCTCCCTTGTGCTCACACTGTCAGAATATAGCACCTGTATTTGGAAACCCTCCTAGACGGTTTTCTTACAGAGAGATAGAAGAAGCTACAGACATGTTCTCAGATTTAAATTTTTTGGCTGAAGGTGGATTTGGTGTGGTTCACAAAGGAATACTGAAAGATGGCCAGGTTGTCGCAGTCAAACAAATTAAATTTAGTGGCTCTCAAGCAGATCTTGATTTCAGCAGGGAAGTTCGGGTTTTGAGTTGTGCCCAACACAGGAATGTTGTATTACTGATAGGATTTTGCACAGAAATCAATGCGAGGATATTAGTCTATGAGTACATATGTAATGGATCCTTAGACCTCTGCTTACATGGCAACAAGAGCATACCTTTGGACTGGAACTCGCGCTTAAAGATTGCAATCGGAGTTGCACGAGGCTTGCGCTATCTCCATGAAGATTGTAGAGTTGGTTGCATTGTGCACAGAGACATTCGCCCTAAAAATATTCTCTTAACGCATGACTTTGAACCCCTGGTGGCTGATTTTGGGCTTGCTAGATGGCAATCAGAATGGAACATAAATACAGAAGATCGTGTTATGGGAACTTCAGGGTACATTGCACCAGAGTATCTTGATGCTGGAATTCTTACGTGTAAAGTAGATGTATATGCATTTGGAATTGTTTTATTAGAGTTAATAACTGGTCAAAGAATTTGTGAGTTGGAACAGTTCAATGAACACTCGTATCTTTCTGAATTGTTTCACCCCCTACACATGTTGGACCCCAATCATATCTTACAAAATGTTGGATCTCTCAACCCATGGTTGGATTCTAACGGGTCACTAGAATTTAATCTTCAATTTCAAGCCATGGCACAAGCTGTGTCACTTTGTCTACGTCTGGATCCTGATAACAGACCCGCAATATCAAAGATCCTCAGAGTGCTTGAAGGGGGCAATGCAGTTCGTTCTTTGGGTTTAGACATCAATTCAGTTGGTAACATAAGTGGTCATTTAAGTGGTTTGAGTTCTCATACTCCTCCTAAAGGTAAAATAAGCCATTCTCGTAAGTTATCACATTGA 2202 0.4237 MLRGEIVGSKSARHTATTATVSNKVLVAVKADKVISNTALAWALTHIVHSSDSITLLAVYSTEKTGRRFWNFSRLAGDCSNGRAGKSPEQISDISESCAQMVFQLHNHIEVRVKIKVVTGSPSGAVAAEARWSGSHWVILDKKLKQEVKHCMDELNCSIVVMNGSQPKVLRLNLGGPSDELQTPFFSTSSSPGLEIKKLNGRRLKHSTPVGSPEVAGSSVITNTGLDSVSSSDSMTSPFLVYKENPLYNGQGPRKRTSKPINKPKDFNFQPPSYFNLERDSPPPSRKLLTSSVASDNNTEIWISQNHINNDKLQRAENRMIQRTKSPNSKTLLETFLHSDQEKRTDELEFNKAQSVSYVTSSSIRDSPIPLGRNSSIPPPLCSHCQNIAPVFGNPPRRFSYREIEEATDMFSDLNFLAEGGFGVVHKGILKDGQVVAVKQIKFSGSQADLDFSREVRVLSCAQHRNVVLLIGFCTEINARILVYEYICNGSLDLCLHGNKSIPLDWNSRLKIAIGVARGLRYLHEDCRVGCIVHRDIRPKNILLTHDFEPLVADFGLARWQSEWNINTEDRVMGTSGYIAPEYLDAGILTCKVDVYAFGIVLLELITGQRICELEQFNEHSYLSELFHPLHMLDPNHILQNVGSLNPWLDSNGSLEFNLQFQAMAQAVSLCLRLDPDNRPAISKILRVLEGGNAVRSLGLDINSVGNISGHLSGLSSHTPPKGKISHSRKLSH 733
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g05699 733 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 383 486 - -
Vivi4g05699 733 SMART tyrkin_6 411 689 IPR020635 GO:0004713|GO:0006468
Vivi4g05699 733 Gene3D Phosphorylase Kinase; domain 1 386 486 - -
Vivi4g05699 733 Gene3D HUPs 7 175 IPR014729 -
Vivi4g05699 733 PANTHER OS01G0750732 PROTEIN 160 692 - -
Vivi4g05699 733 MobiDBLite consensus disorder prediction 713 733 - -
Vivi4g05699 733 MobiDBLite consensus disorder prediction 244 290 - -
Vivi4g05699 733 ProSitePatterns Tyrosine protein kinases specific active-site signature. 532 544 IPR008266 GO:0004672|GO:0006468
Vivi4g05699 733 SUPERFAMILY Protein kinase-like (PK-like) 391 689 IPR011009 -
Vivi4g05699 733 ProSiteProfiles Protein kinase domain profile. 411 696 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi4g05699 733 Pfam Protein kinase domain 414 686 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi4g05699 733 FunFam Os07g0541700 protein 487 575 - -
Vivi4g05699 733 Gene3D Transferase(Phosphotransferase) domain 1 487 698 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g05699 Vivi-Chr4 193369055 193375309 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-2 Vivi4g05699 Pkinase 8.4e-42 CL0016