Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g05694 ATGGCCGGTGAAGGACCCAACGGCGGTGGAAGCAAGCCATGGCAGGAAGACATTTACTGGACCCATTTCCAGTTCATCCATTTCACCCAATTTCTGCACAACGATTTTCAACAACAGCTTGCACTTCCCAAAACATTTTCAGACAATTTAAAGAAGAAGTTGCCAGAAAATGTTGCCCTAAAAGGTCCTAGTGGAGTTGTGTGGAATATAGGGCTGGTAATTAGAGATGATTCTGTTTACTTCGTGAACGGTTGGGAACGATTTGTGAAGGATCACTCTTTGAAAGAGAATGATTTCCTTGTCTTTAAGTACAATGGTGAATCACTCTTTGAGGTTTTAGTCTTTGATGGAAACAGTTTCTGTGAGAAGGCAGCTTCTTATTTTGTTGGAAAATGCGGACCTGCTCAAACTGAACAAGGGGGTAGCAAGGCAAAGGAAAACAACAATTCTGTTGAAGAAGTCAATACTGCTTCTAATGGTGGCGTTGAATGTGGTTCATCGGAGAAATTTCGGCGTCTTAAGAAAGTAGGAACACCATTAGCTGTACCTTTTGAAACTGCCAACGGAAAGACTTCCAATGCTGGTGTAAGAATTGATTCCCCTGAGCTGTTTGCGGCGGATACAGTCACCAAGACCACACCTGTAGCAGTTCCCTTCCAATCAGCTGCAAAAAGGACCAAGAAGCCTGTTAATGAAGTTACGCCTGTCGTCCATACTAAGAAGCGAGGAAGACCACCAAAAGTAGATAATTCTTCGGAGACAATTCGTGATTTGGTGGCTTACAGCAAGGAACACTCAGGGAATGTATATATCAGACAACATAAAGAGAAGATTCCCACGCCCCTTCCCGACGCTGATCTGCCACTTGAACCTGTACTTGTTGAATCACGACATTCTGTTAGAACATTTCGAGCACCAGATAGATATTCACCAGACAGATAG 942 0.4342 MAGEGPNGGGSKPWQEDIYWTHFQFIHFTQFLHNDFQQQLALPKTFSDNLKKKLPENVALKGPSGVVWNIGLVIRDDSVYFVNGWERFVKDHSLKENDFLVFKYNGESLFEVLVFDGNSFCEKAASYFVGKCGPAQTEQGGSKAKENNNSVEEVNTASNGGVECGSSEKFRRLKKVGTPLAVPFETANGKTSNAGVRIDSPELFAADTVTKTTPVAVPFQSAAKRTKKPVNEVTPVVHTKKRGRPPKVDNSSETIRDLVAYSKEHSGNVYIRQHKEKIPTPLPDADLPLEPVLVESRHSVRTFRAPDRYSPDR 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g05694 313 Pfam B3 DNA binding domain 32 116 IPR003340 GO:0003677
Vivi4g05694 313 CDD B3_DNA 27 116 IPR003340 GO:0003677
Vivi4g05694 313 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS11G0197600-RELATED 33 240 IPR044837 -
Vivi4g05694 313 SUPERFAMILY DNA-binding pseudobarrel domain 24 118 IPR015300 -
Vivi4g05694 313 ProSiteProfiles B3 DNA-binding domain profile. 25 118 IPR003340 GO:0003677
Vivi4g05694 313 Gene3D - 21 121 IPR015300 -
Vivi4g05694 313 SMART B3_2 25 118 IPR003340 GO:0003677
Vivi4g05694 313 MobiDBLite consensus disorder prediction 137 163 - -
Vivi4g05694 313 MobiDBLite consensus disorder prediction 140 163 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g05694 Vivi-Chr4 193267052 193277761 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Vivi4g05694 B3 2.5e-16 CL0405