Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g05669 ATGATGCAAGGAAGCTTGAGAAATGGTAGTAAAGGTGGAAAATCTTCAACCATTGAAAGAAAGTTGGCATTGCAACAAGATGTGGATAGTTTGAAGAAGAAGCTTAAGCATGAGAAGAGCATTAACATGGCATTGGAGAGAGCTTTCAATAGACCTTTAGGAGTTTTACCTCGTCTTCCTCCTTATCTACCTCCTTATATACTAGCACTTCTTGCTGAAGTGGCAGTTTTGGAAGAGGAAATTGTTAGGCTTGAAGAGAAAGTTGTGCATTTCAGGCAAGGTTTGTATCAAGAAGCTGTTTACATGTCATCTTGTAAGACCAGATTGGAGAGTTCCTCGCCTCGACCGAATAATTCGAACACAACAACAACAATGGATAGTTCTAAATTAGATGAATTGAAGTCTCTTTCACAAACAGTTGATGATTCTGAAGAAACATCTAGTTATAGGCCTATCATAGAGAATATACAAGGAAAAGAGAATCAATCCTGCAATGATTCTTTTAAGAGAAGGCTTCAACCGTCGAAAATAATGAGTAAATCTCCAATTAAAAATCTTCATGTTGACAATAAGTTATTGCATAAAAAAGCGCATTCTCCGAAAAAGAAGCAAGAACCAAAGGTAAAGGACCAGCAAGTAGCAGAACTAAGACATCCTAGTCTACACCAAATGCCAACAGAAGCTGACAGTCCAAATGTGATTTCTGAAAATATTCTAAAGTGCTTATCAAGCATTCTCTCGAGGATGAGTTCTTTGAAGAATTCAGGTTTTACTGGCGACATATCATCACCCTTATGGACTCGAAAACCTCGAAACTGTGTGGAAAGAACAGAGTTCTGGGATCCGTATGGTATCTGTCTGGATTTTGGAAAGAGGGATATTGGTCCCTACAAGCATTTATGTGCAATTGATGCTAAATCTTTCAATGCAAAAAGAACTGCAAATACTTTGTTTTTACTACACCGGTTGAAACTTCTTTTTAGGAAACTAGCCACTGTCAACATGGAAAATCTCAACCATCAGGAGAAGCTTGCTTTCTGGATCAACACCTATAACTCGTGTATGATGAATGCATTCATAGAGAACGGTATACCAGAGAGTCCTGAAATGGCTGTTGCAATGATGCGGAAGGCGAAAATAGATGTGGGTGGACACGTACTAAGCGCAACAACGATAGAACATTTCATTTTAAGACTTCCTTATCACTACAAATTTACGTTTTCGAAGGGAGCGAAAAATCATGAAATGATAGCAAGAAGCATTTATGGATTGGAACTATCCGAACCTCTAGTGACATTTGCTCTCTCTTGTGGAACTTGGTCCTCTCCTGCTGTGAGAATTTACACAGCATCCCATGTGGAGAATGAACTGGAAGTGGCCAAAAGAGAATACTTACAAGCAACTGTTGGAATTTCAACAACCAAATTTGCCATCCCAAAGCTTCTGGATTGGTATTTACAGAACTTTGCAAAAGACTTGGAATCTTTGATGGATTGGATCTGCCTTCAGTTACCAAGTGAACTTGGAAAAGAAGCTATTAAATTACTTGAGATGAGAAAAACTGAACCCCTCTCACAATTTGTACAAATCATGCCTTATGAGTTCAGCTTTAGATACTTGCTTTGCACATAA 1632 0.3848 MMQGSLRNGSKGGKSSTIERKLALQQDVDSLKKKLKHEKSINMALERAFNRPLGVLPRLPPYLPPYILALLAEVAVLEEEIVRLEEKVVHFRQGLYQEAVYMSSCKTRLESSSPRPNNSNTTTTMDSSKLDELKSLSQTVDDSEETSSYRPIIENIQGKENQSCNDSFKRRLQPSKIMSKSPIKNLHVDNKLLHKKAHSPKKKQEPKVKDQQVAELRHPSLHQMPTEADSPNVISENILKCLSSILSRMSSLKNSGFTGDISSPLWTRKPRNCVERTEFWDPYGICLDFGKRDIGPYKHLCAIDAKSFNAKRTANTLFLLHRLKLLFRKLATVNMENLNHQEKLAFWINTYNSCMMNAFIENGIPESPEMAVAMMRKAKIDVGGHVLSATTIEHFILRLPYHYKFTFSKGAKNHEMIARSIYGLELSEPLVTFALSCGTWSSPAVRIYTASHVENELEVAKREYLQATVGISTTKFAIPKLLDWYLQNFAKDLESLMDWICLQLPSELGKEAIKLLEMRKTEPLSQFVQIMPYEFSFRYLLCT 543
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g05669 543 PANTHER EXPRESSED PROTEIN 10 542 - -
Vivi4g05669 543 Pfam Protein of unknown function, DUF547 336 465 IPR006869 -
Vivi4g05669 543 Pfam Leucine-zipper of ternary complex factor MIP1 19 98 IPR025757 -
Vivi4g05669 543 Coils Coil 67 94 - -
Vivi4g05669 543 MobiDBLite consensus disorder prediction 107 156 - -
Vivi4g05669 543 Coils Coil 28 48 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g05669 Vivi-Chr4 192794545 192797595 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi4g05669 4 192794545 192797595 Vivi4g05669 4 192794545 192797595 ECH
Vivi4g05659 4 192649739 192652715 Vivi4g05669 4 192794545 192797595 PCT