Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g05666 ATGGCACTGAACGATTTCTTCGCCGGCGAGATAGCAACGGAGCTTCTCAAAATGCTCATATCAATATCTCGAAAATCTCTTCTATGCAGAACAAGCGCAGAGCAGCTCAGATCCTACATCGACGATATCCTCCCAACCATACAAGAAATCAAATACACCGGCGTCGAGTTACCGGAGCAACGGCAGTTTCAGCTCGACCGTTTCTCGGAGATTCTCCGTTCCGGCGTGGAGCTCTCTCACAAGGTTCTCTCCTCAAGCCGGTGGAACGTGTACAAGAATCTTCAACTAGCAAAGAAAATGGAGAAGCTTGAGAAGAACGTTTCGAGGTTCATGCAAGGTCCCATGCAGGTTCATACATTGGCTGACGTGCACCACACGCGATTCGAGATGGCCGAAGGGTTCGATCGGGTGGATAGGAAGCTGGAGAAGTATTTTGGTGCCATGAAGATTGGTGTGGGAGGTGGAGGGTGGGTGGAGGAAGCTGTGAGGTCTTGTATGGAGGAAGATGAGAATCGGGTTGAGGGTAATTCTGGAAATTTGAATTTGAGTATTGGTTTGGATTTGGGGAAGAAGAGAGTTATAGAGAAAGTTGTTGGAAGAGAGGATTTATGGGTTGTTGGGATTTGTGGAATTGGTGGATCTGGAAAAACTACTCTTGCTAGAGAGGTTTGTAGAGATGAACAAGTGAGATGTTATTTTAAGGAGAGAATCTTGTTTCTAACTGTTTCACAATCTCCAAATGTGGAGCAGCTAAGGACAAAGATTTGGGGACACATCATGGGAAACAGGAACTTGAATCCAAATTATGATGTTCCTCAATGGATACCGCAATTTGAATGCAGAAGTGAGGCTAGAACTTTGGTTGTTCTAGACGATGTTTGGTCGCTCTCGGTTCTTGAACAGCTTGTGTATAGAATACCAGGTTGCAAGTTTGTTGTGGTTTCTAGGTTCAAATTTCCAACAGTATTCAATGAAACTTATGAGGTTGAATTGTTGAGTGAAGAGGATGCTTTGTCTTTGTTCTGTCACCATGCTTTTGGACAGAAATCGATTCCTTTTACGGCGAATGAGAATTTGGTTAAACAGGTTGTGAGTGAGTGTGAAAAGCTTCCATTGGCTCTGAAAGTGATCGGAGCTTCGTTACGAGATCAAACCGAAATGTTTTGGGAAAGTGTTAAAAACAGGTTATCTCAAGGCCAAAGTATTGGAGAATCTCATGAAATCAACCTAATCGAAAGAATGGCGATAAGTATAAACTACTTAAGAGAAGAGATCAAGGAATGTTTCTTGGACCTTTGTTCATTCCCTGAGGATAAGAAAATCCCTCTAGATGTTCTCATCAATATGTGGGTTGAAATCCATGATATTGATGAGAAAGATGCTTTTGCTATTGTTGTTGAGCTCTCTAACAAAAATCTTCTCACCTTGGTGAAAGAAGCGCGTGCTGGTGGCATGTATAGTAGTTGCTTTGAGATCTCAGTTACTCAACATGATGTACTTAGAGACCTTGCACTTAATTTGAGTAACCGCGAGACTATTAATGAACGCCGACGATTAGTTATGCCAAAACGAGAGAACGGGCTCCCCAAAGAATGGATAAGACGCAAACACAAGCCATTCGAGGCACAAATTGTTTCGATTCACACAGGTGAAATGAAGGAAAATGATTGGCCTAAACTTGAATTTCCAAAGGCTGAAGTTTTGATCATAAATTTCACCTCTAAGAATTACTTTTTACCTCCTTTCATAGATAAAATGCCAAATTTAAGAGCATTAATAGTAATAAACTATAGTGCATCCTATGCTTGTCTTCACAATGTTTCAGTTTTCAATAACTTAACCAACTTGAGAAGCCTATGGCTTGAAAAAGTTTCCATCCCTCAATTTGGAGGCATTGTCATGGAAAACTTAGGCAAGTTATTTATAGTTTTGTGTAAGATTAATAACAATCTAGAGGGTAAAGAGGTAAATCTGTCTCGAATCTTTCCGAACCTCTCTGAGATCACTCTTGATCATTGTGATGATGTAACTTCTTTGCCCTCAAGCATTTGTAAGATACAATCTCTCAAAAACATGAGTCTCACTAATTGCCATAATTTGGCACAACTTCCTGCTGAATTAGGCATGCTGAGATTTCTCGAGATTCTTCGGTTATACGCTTGTCCGGAATTGAAAACGCTTCCTCCTAGTGTCTGCGACATGATTAGATTGAAGTATATCGATGTTTCGCAATGTGTTAACCTATCATGTTTTCCTGAAGAGATTGGAAGATTGGTAAGTTTGGAAAAGATTGACATGAGGGAATGCTCCATGATTAAGAATGTGCCTCAGTCTGCTATTTTATTGAAGTCTTTGAGGCTTGTAATTTGTGATGAGGAAGTGTTTGGTGTGTGGAAAGATGTTGAGAAGGCCAAGCCTAATGTTCATGTTCAAGTGTCAGAACAGTACTTTGATTTGGAATGGCTTAGAGAATGA 2475 0.4077 MALNDFFAGEIATELLKMLISISRKSLLCRTSAEQLRSYIDDILPTIQEIKYTGVELPEQRQFQLDRFSEILRSGVELSHKVLSSSRWNVYKNLQLAKKMEKLEKNVSRFMQGPMQVHTLADVHHTRFEMAEGFDRVDRKLEKYFGAMKIGVGGGGWVEEAVRSCMEEDENRVEGNSGNLNLSIGLDLGKKRVIEKVVGREDLWVVGICGIGGSGKTTLAREVCRDEQVRCYFKERILFLTVSQSPNVEQLRTKIWGHIMGNRNLNPNYDVPQWIPQFECRSEARTLVVLDDVWSLSVLEQLVYRIPGCKFVVVSRFKFPTVFNETYEVELLSEEDALSLFCHHAFGQKSIPFTANENLVKQVVSECEKLPLALKVIGASLRDQTEMFWESVKNRLSQGQSIGESHEINLIERMAISINYLREEIKECFLDLCSFPEDKKIPLDVLINMWVEIHDIDEKDAFAIVVELSNKNLLTLVKEARAGGMYSSCFEISVTQHDVLRDLALNLSNRETINERRRLVMPKRENGLPKEWIRRKHKPFEAQIVSIHTGEMKENDWPKLEFPKAEVLIINFTSKNYFLPPFIDKMPNLRALIVINYSASYACLHNVSVFNNLTNLRSLWLEKVSIPQFGGIVMENLGKLFIVLCKINNNLEGKEVNLSRIFPNLSEITLDHCDDVTSLPSSICKIQSLKNMSLTNCHNLAQLPAELGMLRFLEILRLYACPELKTLPPSVCDMIRLKYIDVSQCVNLSCFPEEIGRLVSLEKIDMRECSMIKNVPQSAILLKSLRLVICDEEVFGVWKDVEKAKPNVHVQVSEQYFDLEWLRE 824
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g05666 824 Gene3D Ribonuclease Inhibitor 529 804 IPR032675 -
Vivi4g05666 824 Gene3D - 183 323 IPR027417 -
Vivi4g05666 824 PRINTS Disease resistance protein signature 205 220 - -
Vivi4g05666 824 PRINTS Disease resistance protein signature 280 294 - -
Vivi4g05666 824 PRINTS Disease resistance protein signature 367 381 - -
Vivi4g05666 824 PRINTS Disease resistance protein signature 684 700 - -
Vivi4g05666 824 PANTHER PLANT BROAD-SPECTRUM MILDEW RESISTANCE PROTEIN RPW8 3 822 IPR039203 GO:0050832
Vivi4g05666 824 Gene3D - 414 503 IPR036388 -
Vivi4g05666 824 Pfam NB-ARC domain 191 411 IPR002182 GO:0043531
Vivi4g05666 824 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 191 432 IPR027417 -
Vivi4g05666 824 ProSiteProfiles RPW8 domain profile. 1 149 IPR008808 -
Vivi4g05666 824 Pfam Arabidopsis broad-spectrum mildew resistance protein RPW8 9 133 IPR008808 -
Vivi4g05666 824 Gene3D - 331 413 IPR042197 -
Vivi4g05666 824 SUPERFAMILY L domain-like 567 788 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g05666 Vivi-Chr4 192764305 192767695 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g05666 194 728 WRKY Transcription Factor Family AT5G45050 24.357 7.32e-11 64.3