Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g05644 ATGGAGGGTGTCACAAAATTATCTGTTGAACAAATTCAACCCCCTACATATGGAAACTTAGTAACCATTCTTAGCATTGATGGTGGTGGCATTAGAGGTCTCATTCCTGCTGCAATTATTGAATTCCTTGAATCTCAACTTCAGGAATTGGACGGTGAAGATGCGAGACTTGCAGACTACTTCGATGTAATATCCGGAACAAGCACAGGCGGTCTTGTTACTGCCATGTTAGCCGCTCCTGATCAAAACAATCGTCCACTTTTTGCTGCCAAAGATATCAAACCCTTCTACCTCGAACACTGCCCAAAAATATTCCCACAACATAGAGGCGTAGGTGGGTTGATGTTAGCGAAAGTAATGAGATCGCTTGGAGGACCTAAATATGATGGAAAGTATCTTCATGAAGTTGTGAGACAGAAGCTTGGTGACGTAAAGTTGAATGAAACCATCACCAACATTGTTATTCCAACATTTGATATCAAGACTTTGCAGCCAATTATTTTCTCATCTTATCAGATTAAGAATACTCCTTGTTTGAATGCGAAACTCTCCGACATATGCATTAGTACATCTGCTGCACCGACTTATCTTCCTGCTCATAACTTCATAAATAAAGATGATGCTGGAAAAGAAGAAGAGTTCAATCTCATTGACGGTGGTGTTTGCGCAAATAATCCGGCTTTAGTGGCTATGAATGAAGTGACAAAGCAAATCATCAAACAAAGTCCTGATTTTTTTCCTATTAAGCCTTTGGAATATGGTAGGTTTCTGATAATTTCAATAGGGACCGGAACAGCGAAAAATGAAGAAAAGTTTAATGCACAAATGGCTGCAAAATGGGGATTATTGGATTGGTTAACACATAGTGGTTCTAATCCTTTAATTGATGTTTTTACTCAATCAAGTGGTGATATGGTTGATTTTCATTTATCTGCTGTCACTCAAGCTCTTCATTCAGAAGATAATTATCTTCGAATTCAGGATGATACATTGACTGGAATAGATTCTTCGGTCGACATTGCTACCGAGGAAAACTTGAAGAAACTTTGCCAAATTGGTGAAACCTTATTGAAGAAACCAGTTTCTAGGGTTAATTTAGAAAATGGTCACTTTGAGCCATTGAAAAGTGGAGAAACTAATGAAGATGCTCTCAAGAGGCTTGCAAAAATACTTTCACAAGAGAGGAGACTCCGCGAAATGAGATCCCCGCATACAAGTAGAGGCAGGAAAAATCGGCATCTAGCTTAA 1248 0.3894 MEGVTKLSVEQIQPPTYGNLVTILSIDGGGIRGLIPAAIIEFLESQLQELDGEDARLADYFDVISGTSTGGLVTAMLAAPDQNNRPLFAAKDIKPFYLEHCPKIFPQHRGVGGLMLAKVMRSLGGPKYDGKYLHEVVRQKLGDVKLNETITNIVIPTFDIKTLQPIIFSSYQIKNTPCLNAKLSDICISTSAAPTYLPAHNFINKDDAGKEEEFNLIDGGVCANNPALVAMNEVTKQIIKQSPDFFPIKPLEYGRFLIISIGTGTAKNEEKFNAQMAAKWGLLDWLTHSGSNPLIDVFTQSSGDMVDFHLSAVTQALHSEDNYLRIQDDTLTGIDSSVDIATEENLKKLCQIGETLLKKPVSRVNLENGHFEPLKSGETNEDALKRLAKILSQERRLREMRSPHTSRGRKNRHLA 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g05644 415 Pfam Patatin-like phospholipase 24 231 IPR002641 GO:0006629
Vivi4g05644 415 FunFam Patatin 13 403 - -
Vivi4g05644 415 SUPERFAMILY FabD/lysophospholipase-like 19 368 IPR016035 -
Vivi4g05644 415 ProSiteProfiles Patatin-like phospholipase (PNPLA) domain profile. 24 231 IPR002641 GO:0006629
Vivi4g05644 415 CDD Pat17_isozyme_like 18 369 - -
Vivi4g05644 415 MobiDBLite consensus disorder prediction 394 415 - -
Vivi4g05644 415 PANTHER XYLOSE ISOMERASE 9 399 - -
Vivi4g05644 415 Gene3D Cytosolic phospholipase A2 catalytic domain 10 403 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g05644 Vivi-Chr4 192392619 192394972 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g05644 12 404 Miscellaneous Gene Families AT2G26560 67.005 0.0 534
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi4g05644 4 192392619 192394972 Vivi4g05644 4 192392619 192394972 ECH