Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g05628 ATGCAAGCTTGGGGGAGGTTAGGAGGTTATATAAGACGCGGTGTGTGTAATGTTTCTGGGCCGTTTCTTCCGTTCGGGGGCGCTGTTGATATTATTGTTGTTCAGCAGAAAGATGGGAGCTTTAAAAGTTCTCCTTGGTATGTTAGGTTTGGGAAATTTCAACGGGTTATGAAGGCGGCGAAGAGGGAGAAGGTTAAGGTTAGTGTTAGTGTTAATGGGGTTGAGACGGATTTTCATATGTGTTTGAGTCCTAAAGGGGAGGCTTTTTTTCTTCATGCGAATTCTTCGCAACATGGTGAAGGAGAAGAAGAGGGGCAAGAGGAACAAGAAGAAGAAGATGGGATAGGATCTATGTGGGGTTATGATGATATTCAAGTGAGAGGGAGTAATAAGAGGCAATTTAAGTCGAAAAGTTGTAACTTTCGTTCGGAGGATCCGGTTATAGATAGGACTGGTTCTCGCCGTTCGAGGATGTGTAGGCTTGTATTTGGGCCGAGTTCTGATGGTGGTGATGGTGAAGATGTTGATGCAGATTTAGTGGAGCGTGCTGAAATTGCAGCCAAGTTGTTGGATTTAAGGTGGTCTACGAATCTCACTTTTGATGAACTTCCTTATCGGGAAAGAAAGAAGACTCGAGGTGGTAACTTGGACAAGGAGAAAGGCAAGACTGAATCTGGCGAGGTTATTCGCCTTGCAAGTGAAGTATGTGGAGAAGTTCATGTTCATGACGAGGTTTTGCATGCTACAAGTCTGCAGCTACCTGAGGGTGGAAAACCTGAGGGAGTTACTAGGAATGTCCGTCTCGAGAGACCGGTAACGGATTGTGGTATTTATGATGTTGCGGATGTTGGAAGCAGGGCAAAGTTTCAAAAGTCTCAGACTGTCAATATTGGTAGAAGGGATCGTTCTGTTAAGAAGGTTAGCGTAAATACTCCAACGTCTGAACAACTGTCATCTTTGAATCTGAAGGAAGGGAGGAACACGATTACCTTCGGTTTTTCTACACCTATGATGGGCATGCGGCAGATTGATGCTCGGATATTTTTGTGGAAATGGAATACTCGTATAGTGATATCAGATGTGGATGGGACAATTACAAGGTCAGATGTTCTAGGTCAATTCATGCCTTTAGTTGGGATTGACTGGTCACAAACTGGTGTTGCTCATTTATTTTCAGACATCAAGGAAAATGGCTACCAGTTGCTTTTTCTCAGTGCTCGTGCAATTTCTCAAGCACATAACACCAGACAATTCCTATTCAATCTTAACCAGAACGGAAAAGTCTTACCAGATGGTCCGGTTGTCATTTCCCCCGACGGACTTTTTCCTTCTTTATATAGAGAAGTTATCCTCAGGGCTCCGCACGAGTTCAAAATTGCATGTTTAGAGGACATCAGGGCACTTTTTCCTCCTGATTGCAATCCGTTCTATGCTGGATTTGGAAATAGAGATACCGATGAAATCAGCTACCTTAAGGTTGGAATCCCTAAAGGAAAAATATTCATCATTAATCCCAAGGGTGAGATTTTTATAAACCGACGGTGTTTAGACACAAATTCATACACTTCTCTTCACACTCTCGTGAACGGAATGTTTCCCCCTACAAACACATCTGAACAGGAGGATTACAATTCATGGAACTTCTGGAAGTTGCCCCCTTTCGAATAA 1668 0.4323 MQAWGRLGGYIRRGVCNVSGPFLPFGGAVDIIVVQQKDGSFKSSPWYVRFGKFQRVMKAAKREKVKVSVSVNGVETDFHMCLSPKGEAFFLHANSSQHGEGEEEGQEEQEEEDGIGSMWGYDDIQVRGSNKRQFKSKSCNFRSEDPVIDRTGSRRSRMCRLVFGPSSDGGDGEDVDADLVERAEIAAKLLDLRWSTNLTFDELPYRERKKTRGGNLDKEKGKTESGEVIRLASEVCGEVHVHDEVLHATSLQLPEGGKPEGVTRNVRLERPVTDCGIYDVADVGSRAKFQKSQTVNIGRRDRSVKKVSVNTPTSEQLSSLNLKEGRNTITFGFSTPMMGMRQIDARIFLWKWNTRIVISDVDGTITRSDVLGQFMPLVGIDWSQTGVAHLFSDIKENGYQLLFLSARAISQAHNTRQFLFNLNQNGKVLPDGPVVISPDGLFPSLYREVILRAPHEFKIACLEDIRALFPPDCNPFYAGFGNRDTDEISYLKVGIPKGKIFIINPKGEIFINRRCLDTNSYTSLHTLVNGMFPPTNTSEQEDYNSWNFWKLPPFE 555
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g05628 555 PANTHER LIPIN 295 553 IPR026058 -
Vivi4g05628 555 Pfam lipin, N-terminal conserved region 25 98 IPR007651 -
Vivi4g05628 555 SMART lns2 356 512 IPR031315 -
Vivi4g05628 555 SUPERFAMILY HAD-like 349 498 IPR036412 -
Vivi4g05628 555 Pfam LNS2 (Lipin/Ned1/Smp2) 311 533 IPR013209 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g05628 Vivi-Chr4 192215854 192220642 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi4g05628 4 192215854 192220642 Vivi4g05628 4 192215854 192220642 ECH
Vivi4g05628 4 192215854 192220642 Vivi3g01934 3 31972086 31981287 PCT