Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g05619 ATGGAGGAAGTTGAAAACAAACCAACCTCCTCAAGAAATGCTGAACAAACTCCTCAAGCCGAAACCTCTCAAGAAAATACTGATATTATAGCTCCGATCGATAATCAATCTTCCATTGAAGCTTCCATCGACTCACTCGGTGATAACAAAATACCGGAACATGATATCACTCATTCTCCAGCTGTGACCGATTTCCCTGAAGTAGAATCGAACTCAACGAATGTTTCCGTTGATCAACCTATAAAACAAGATGAATATCTTACAACAGATAATTCAACTTCAACCTCACAAGAAATGGAACACATCCACCAAGGAACTATAGCTGCAGATATCAATAACAGACAACAAGACGGTGGTTCAACTGTTACTGCTAGCGGCGACAACGTTGATAATCTTATTACGGAGCCCTCAACATCCTCTTCTATAACAAAAGAGTTTCCGATTGAACCTATAGATTCACCTCGAGACGGAGTTATTGACGCACCTCAAGAAAACTTAGTTTCAACCTCAAATTCTGAAGTTCATGTAGCAGAAGAAAGTCATCAAGAACCTGTAGTTGCAGAATCCGAATCAGGATCTTTAGAAGATATAGTGAACACGGAGAAGGATGGTGATTCTACTGTCAGTGTTGTCGATAATCAGATTGAACATGGATCCGGATCTTTAGAAGATATAGTGAACACGGAGAAGGACGGCAATTCTACTGTCAGTGTTGTCAATAATCAGAGTGAACATGGATCTGGATCTTTAGAAGATTTAGTGAAGATGAAGAAGGATGGTGATTCTACTGTCAGCGTCGTTGATAATCAGATTGAACCATCGGCTTCGTCGTCTGAAAAAATAGAGTTGCAGAATGATAGCAAAGAACTAAATGTAAATTTCAATGAAGTCAAGGTTTCGGATGTTGCTGGTGAAGGTGTTGACTCACCTACAAACGAGAAGAAAATCGAGGAAAAAAGAGGTATAATTGATACAGCATCTCCATTCGAATCTGTTAAAGAAGCTGTTTCTAAATTCGGAGGAATCGTCGATTGGAAGGCTCATAGAATGGTGACCGTCGAGCGGCGCAAGCAAGTTGAACAAGAGCTTGAAAAAGCACACGACGAGATTCCGGAGTACAGGAAAATATCGGAGGCGGCTGAACAAGAAAAAGTTCAAGCACTTCAGGAGCTTGACACTACAAAAAGACTAATAGAAGAACTAAAACTCAACCTAGAGAGAGCACAGACCGAAGAGCATCAAGCAAGACAAGACTCGGAACTCGCAAAGCTTAGAGTGGAAGAGATGGAGCAAGGTATTGCCGAAGATTCCAGTGTGGCAGCCAAGGCGCAGCTTGAGGTCGCGAAAGCCAGGTATACGGCTGCCATTACCGAGTTTTCATCGGTGAAAGAAGAGCTTGATGCATTGCGTGTGGAATACGCTTCCTTAGTTGATGAAAAAGGTGAAGCTATTAACAGAGCCGAAGAGGCTGTTGCTGCGTCAAAGCAAGTAGAAAGGTCGGTAGAAGATTTGACAATCGAGCTGATTGCCACAAAAGAGTCTTTGGAAACCGCACATTCTGCGCATATGGAAGCAGAAGAACACCGAATAGGAACCGTCATGGCAAGAGATCAAGATTTACTCAATTGGGAGAAGGAACTTAAACAAGAAGAGCAAGAATTAGAAAAACTCAACCAGAAAATTTTGTCGGCCGAGGATCTTAAATCTAAGCTGAGTAAAGCTTCTACGCTGCTTCTCGATTTGAAATCCGAATTAAATGCGTATATGGAATCAAAGTCAAACCAAGAATGCGGCAATGAAGAAGGAGTCTCGAAAGCGGAACAGGACAAAAAATCACACAACGAAATACAAGAAGCAATTGCATCGGCTAAAAAGGAACTTGAGGAAGTAAAGCTTAACATAGAGAAAGCTACTTCTAAGGTAAATTACTTAAAGGTGGCTGCAACATCGTTAAGATCAGAACTCGAACAAGAGAAATTGTCGCTCGCGTTGATTAGGCAAAGAGAAGGAATGGCTTCCGTTACAGTCGCGTCTATTGAAGCCGAGCTGAACAAAACCAAAACGGAAATCAGTTTCGTTCATATGAAGGAAAAAGAAGGCAGAGAGACAATCCTTGAAATGCCGAAGAAACTAAAAGAAGCGGCCGAAGAGGCTAATAAGGCCAACTTGCTTGCCGAAGAAGCTCGCGAAGGGCTTAGAAGAATAAAGGAGGAAGCCGAACAAGCCAAGGCGAGTGCAAGTACCATGAATAGTAGATTACTTGCAGCTCAAAAAGAGATCGAAGCTGCAAGAGCTTCTGAAAGGTTGGCGATAAAAGCAATTAAAACATTGCAAGAGAGCGAATCGGCTAGAAGCAACAACAAAAAAGAAGTGGATTCATCGAACGGTGTGAAACTATCGGTCGAGGAGTACTATAATCTTACCAAACAAGCTCATGAAGCAGAAGAAGAAGCCAATGTGAGAGTTGCGACCGCGAATTCTGAGATTGATATAGCTAAGGAGAACGAATCGAAAACCTTGGAGAAGTTGAATGAAGTGAACAAAGAAATGGCTGCTAGAAGAGAATCTTTGAAGATTGCAATGGGGAAAGCCGAGAAGGCAAGGGAAGGAAAATTAGATGCAGAACAAGAATTAAGAAAGTGGAGAGCCGAACACGGGCAACGAAGAAAAGCCGGCGAAACAGTCCAAAAAGCAGTAAACCCGAACACAAGCCATAGTGGTAAACTCGAACAAAATAATAGGGGAAATATTTCTCATGGACATCACTTTTCAAGTCAAAAGTCTTATGTTCGTGCGAACAATGAAAATGGATCTTCGCCGGATGGGAAAAACGGAAAGAAGAAGAAAAAGTCGTTTTTTCCGCGGGTTTTTATGTTCTTTGCAAGAAGAAAATCACATTCAACTCATTAA 2910 0.4175 MEEVENKPTSSRNAEQTPQAETSQENTDIIAPIDNQSSIEASIDSLGDNKIPEHDITHSPAVTDFPEVESNSTNVSVDQPIKQDEYLTTDNSTSTSQEMEHIHQGTIAADINNRQQDGGSTVTASGDNVDNLITEPSTSSSITKEFPIEPIDSPRDGVIDAPQENLVSTSNSEVHVAEESHQEPVVAESESGSLEDIVNTEKDGDSTVSVVDNQIEHGSGSLEDIVNTEKDGNSTVSVVNNQSEHGSGSLEDLVKMKKDGDSTVSVVDNQIEPSASSSEKIELQNDSKELNVNFNEVKVSDVAGEGVDSPTNEKKIEEKRGIIDTASPFESVKEAVSKFGGIVDWKAHRMVTVERRKQVEQELEKAHDEIPEYRKISEAAEQEKVQALQELDTTKRLIEELKLNLERAQTEEHQARQDSELAKLRVEEMEQGIAEDSSVAAKAQLEVAKARYTAAITEFSSVKEELDALRVEYASLVDEKGEAINRAEEAVAASKQVERSVEDLTIELIATKESLETAHSAHMEAEEHRIGTVMARDQDLLNWEKELKQEEQELEKLNQKILSAEDLKSKLSKASTLLLDLKSELNAYMESKSNQECGNEEGVSKAEQDKKSHNEIQEAIASAKKELEEVKLNIEKATSKVNYLKVAATSLRSELEQEKLSLALIRQREGMASVTVASIEAELNKTKTEISFVHMKEKEGRETILEMPKKLKEAAEEANKANLLAEEAREGLRRIKEEAEQAKASASTMNSRLLAAQKEIEAARASERLAIKAIKTLQESESARSNNKKEVDSSNGVKLSVEEYYNLTKQAHEAEEEANVRVATANSEIDIAKENESKTLEKLNEVNKEMAARRESLKIAMGKAEKAREGKLDAEQELRKWRAEHGQRRKAGETVQKAVNPNTSHSGKLEQNNRGNISHGHHFSSQKSYVRANNENGSSPDGKNGKKKKKSFFPRVFMFFARRKSHSTH 969
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g05619 969 Coils Coil 459 479 - -
Vivi4g05619 969 PANTHER HEAVY CHAIN, PUTATIVE, EXPRESSED-RELATED-RELATED 321 964 - -
Vivi4g05619 969 MobiDBLite consensus disorder prediction 46 85 - -
Vivi4g05619 969 Coils Coil 487 507 - -
Vivi4g05619 969 MobiDBLite consensus disorder prediction 113 146 - -
Vivi4g05619 969 Coils Coil 711 752 - -
Vivi4g05619 969 MobiDBLite consensus disorder prediction 592 611 - -
Vivi4g05619 969 Coils Coil 864 884 - -
Vivi4g05619 969 MobiDBLite consensus disorder prediction 882 953 - -
Vivi4g05619 969 MobiDBLite consensus disorder prediction 113 194 - -
Vivi4g05619 969 Pfam Weak chloroplast movement under blue light 320 888 IPR008545 -
Vivi4g05619 969 MobiDBLite consensus disorder prediction 1 33 - -
Vivi4g05619 969 Coils Coil 349 418 - -
Vivi4g05619 969 MobiDBLite consensus disorder prediction 10 33 - -
Vivi4g05619 969 Coils Coil 533 584 - -
Vivi4g05619 969 MobiDBLite consensus disorder prediction 896 940 - -
Vivi4g05619 969 Coils Coil 815 860 - -
Vivi4g05619 969 MobiDBLite consensus disorder prediction 64 85 - -
Vivi4g05619 969 Coils Coil 606 640 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g05619 Vivi-Chr4 192024398 192028869 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi4g05619 4 192024398 192028869 Vivi4g05619 4 192024398 192028869 ECH
Vivi4g05619 4 192024398 192028869 Vivi3g01927 3 31623164 31628716 PCT