Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g05613 ATGGATGAATCTTTCCCTTACATCATTCTCCTCTTTCTTCTTACTTTACTTACATTCAAGTTCTTTTCAAAACATAAAAATAGAGCAAATCAAACAAGTGCAAAACTTCCTCCAGGTTCAATGGGGTGGCCTTACATAGGACAAACCCTCCAATTCTACTCTCAAGATCCAAATGTTTTCTTCTTCACCAAACAAAAAAGGTATGGAGAAATATTCAAGACAAACATCCTAGGATGTCCATGTGTAATGTTGGCAAGTCCAGAAGCCGCACGTTTTGTATTAGTGACACAATCTCACTTATTTAAACCAACATATCCTAAGAGCAAAGAACGTTTGATTGGTCCTAGTGCTCTGTTTTTTCACCAAGGTGAGTATCATTTGCGTTTGAGGAAGCTTATTCAAAAGTCTCTCTCCCTCGATTCACTTCGCAACTTGGTTCCAAACATCGAAGCCCTAGCCATTTCCACCCTCAAATCATGGAGTGATGATGAAGATGAAGATGGACGCATAATTAACACGTTTAAGGAAATGAAAAAATTTTCATTTGAAGTTGGAATTCTCAAAATATTTGGAAATCTAGAGCCAAGGTTGAGGGAAGAACTGAAGAAGAATTATTGGATTGTTAACAATGGTTACAATTCATTTCCAACTCAAATTCCTGGCACACAATACAAAAAAGCACTCATGGCAAGAAAGAGACTTGGAAGTATTTTAAAGGAAATAATAAGTGAGAGGAAGGAGAAGAAGTTGGTTGAAAATGAAAGAGATCTTTTGAGTTGTTTATTGAATTGGAAAAGTGAAAATGGAGAAATGTTAAGTGATGATGAAATTGGAGATAACATTATTGGAGTGCTTTTTGCTGCTCAAGATACTACAGCTACTGTCATGACTTGGGTGGTCAAGTACTTGCATGATGAACCCAAACTTCTTGAATGTGTTAAGGCTGAGCAGAAGGCAATTCACAAGCAAAATGATGGTAACCTACCTCTCAATTGGAATCAGATTAGAAATATGCCAATTACCAATAAGGTTTTGTTGGAGAGTATGAGAATGGCAAGTATAATATCATTTCCTTTTAGAGAAGCAGTAGCTGATGTAGAATACAAAGGATTTCTAATACCAAAAGGGTGGAAAGCAATGCCATTGTTCAGAAATATTCATCACAATCCAGAATTTTTTCTAGAGCCTAAGAAATTCAATCCTTCAAGGTTTGAGGTTTCACCAAAGCCAAATACTTTCATGCCATTTGGTAGTGGAGTACATGCTTGTCCTGGAAATGAACTTGCTAAGCTGGAGACCTTGATTATGATTCATCATTTGGTTACCAAGTTTAGGTTGGAAGTGGTAGGATCACAATGTGGGATTGAATATGGCCCATTTCCACTGCCTTTGAATGGACTCCCAGCTAGGTGTTGGAGAGAATCTACCAGCAACTAG 1437 0.3737 MDESFPYIILLFLLTLLTFKFFSKHKNRANQTSAKLPPGSMGWPYIGQTLQFYSQDPNVFFFTKQKRYGEIFKTNILGCPCVMLASPEAARFVLVTQSHLFKPTYPKSKERLIGPSALFFHQGEYHLRLRKLIQKSLSLDSLRNLVPNIEALAISTLKSWSDDEDEDGRIINTFKEMKKFSFEVGILKIFGNLEPRLREELKKNYWIVNNGYNSFPTQIPGTQYKKALMARKRLGSILKEIISERKEKKLVENERDLLSCLLNWKSENGEMLSDDEIGDNIIGVLFAAQDTTATVMTWVVKYLHDEPKLLECVKAEQKAIHKQNDGNLPLNWNQIRNMPITNKVLLESMRMASIISFPFREAVADVEYKGFLIPKGWKAMPLFRNIHHNPEFFLEPKKFNPSRFEVSPKPNTFMPFGSGVHACPGNELAKLETLIMIHHLVTKFRLEVVGSQCGIEYGPFPLPLNGLPARCWRESTSN 478
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g05613 478 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 416 425 IPR017972 GO:0005506|GO:0016705
Vivi4g05613 478 Gene3D Cytochrome P450 25 472 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi4g05613 478 SUPERFAMILY Cytochrome P450 32 472 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi4g05613 478 PRINTS P450 superfamily signature 287 304 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi4g05613 478 PRINTS P450 superfamily signature 423 434 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi4g05613 478 PRINTS P450 superfamily signature 343 354 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi4g05613 478 PRINTS P450 superfamily signature 414 423 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi4g05613 478 CDD CYP90-like 65 470 - -
Vivi4g05613 478 PRINTS E-class P450 group I signature 413 423 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi4g05613 478 PRINTS E-class P450 group I signature 276 293 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi4g05613 478 PRINTS E-class P450 group I signature 65 84 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi4g05613 478 PRINTS E-class P450 group I signature 342 360 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi4g05613 478 PRINTS E-class P450 group I signature 382 406 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi4g05613 478 PRINTS E-class P450 group I signature 423 446 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi4g05613 478 PRINTS E-class P450 group I signature 296 322 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi4g05613 478 PANTHER CYTOCHROME P450 26 33 451 - -
Vivi4g05613 478 Pfam Cytochrome P450 37 449 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi4g05613 478 FunFam Abscisic acid 8 26 473 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g05613 Vivi-Chr4 191991523 191995146 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g05613 1 475 Cytochrome P450 AT3G19270 63.445 0.0 631
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi4g05613 4 191991523 191995146 Vivi4g05613 4 191991523 191995146 ECH