Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g05602 ATGGATTCCGAACAATCATTCTATAAAGATTATCTTTTGTTGAAACCAAAGGAGGCAAGTGTTTTTGAACTATGTTGTTTCTTGTGTTCATCAAACACAAGAAATAGAGGATTCATTGATTGCTCAGAAGGACTTGAAGTTAGAGAGTTTGGACAAAGATGGTTTCTTTTCATTTCTGTTGTTGCACAAAAAGTTCTTGTTGCCTTAGAACCCTTGTTGAAAATAGTAGGAGACATGTTGGAGTTGTGGCTCAATCGTATAGCAAGTAATGGAGGATTCATTAGGCTCTTCTTTAACATTCTTAAAGGAGAGATGATAACACCAGAAAAATCGTCGGCCGAGTTCTTAACTGTGGTTGGACATCTTGACCCAAGAGTTAATTTAGACAAAAATATTCATCAAAATGATCCAGAGTACAAAGCATTACTATCTATCATGGCTTCAAAATTTGCTTATGAGAATGAACAATTTATAAGCACAATGGTTACAAATCATTGGGGTATGGAACTTTTGGGACAATACAGCTTTTGGAACGATTACCAAAAGCACGAGTCCACAAAAGCAATGATAATTAAAGATACAAAATCTGAACCCAACTTGATTCTGGTTGCATTTAGAGGAACAATTCCATTTGATGCTGAGCAATGGAAAACAGACATAGATATCTCATGGTTTGACATACCTAACGTGGGTAAGATACATGGTGGGTTCATGAAAGCATTGGGCCTTTTAAAGAACCGTGGATGGCCCAAACAGATAGACGAAAGAGGTGCGCATCGTTATGCTTACTACTCAATTAGAGAGGAGCTTAGAGCAGTATTGAGGGAAAATGAGGATGCAAAATTCATATTGACAGGGCATAGTTTGGGAGGAGCATTGGCTATTTTGTTTATTGCTGTGCTTATATTCCATGAGGAAGAATGGTTGTTGGAAAAGTTAGAAGGTGTTTATACATTTGGGCAACCAAGAGTAGGAGACCAGAAGTTTGGGGAGTTCATGAAAAGCAAGATGAAAATGTATGATGTTAAGTGTTTTAGATATGTTTACTGTAATGATTTGGTTCCTAGGGTTCCTTATGATGATCAATCCCTCTTCTATAAGCACTTCAGCCCTTGCCTCTATTACAATAGCTTGTACCAAGGGAAGGTTCTAGAGGAGGAGCCAAACAAGAATTATTACTCTCTGTTATGGGTGATACCCAAGATGTTGAATGCAGTTTGGGAGGTGATTAGAGGTTTCCTACTACCTTTTTTTGTAGGTAAAGACTATAAACAGAATTGGTTCATGGTGATGTTCAGGTTTGTTGGATTGACATTCCCAGGAGTACCAGCTCATTTCCCTACAGATTATGTCACTTCTGTCCGTTTGGGATCCTTCGACGAACATCCAGAGCTTCAAGATTTCAAAGATGACTAA 1416 0.3806 MDSEQSFYKDYLLLKPKEASVFELCCFLCSSNTRNRGFIDCSEGLEVREFGQRWFLFISVVAQKVLVALEPLLKIVGDMLELWLNRIASNGGFIRLFFNILKGEMITPEKSSAEFLTVVGHLDPRVNLDKNIHQNDPEYKALLSIMASKFAYENEQFISTMVTNHWGMELLGQYSFWNDYQKHESTKAMIIKDTKSEPNLILVAFRGTIPFDAEQWKTDIDISWFDIPNVGKIHGGFMKALGLLKNRGWPKQIDERGAHRYAYYSIREELRAVLRENEDAKFILTGHSLGGALAILFIAVLIFHEEEWLLEKLEGVYTFGQPRVGDQKFGEFMKSKMKMYDVKCFRYVYCNDLVPRVPYDDQSLFYKHFSPCLYYNSLYQGKVLEEEPNKNYYSLLWVIPKMLNAVWEVIRGFLLPFFVGKDYKQNWFMVMFRFVGLTFPGVPAHFPTDYVTSVRLGSFDEHPELQDFKDD 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g05602 471 Pfam Lipase (class 3) 203 361 IPR002921 GO:0006629
Vivi4g05602 471 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 3 463 IPR044819 GO:0004806|GO:0006629
Vivi4g05602 471 CDD Lipase_3 138 376 - -
Vivi4g05602 471 SUPERFAMILY alpha/beta-Hydrolases 141 383 IPR029058 -
Vivi4g05602 471 Gene3D alpha/beta hydrolase 126 404 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g05602 Vivi-Chr4 191850051 191866305 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g05602 9 471 Acyl Lipid Metabolism Gene Families AT1G56630 52.490 8.58e-178 506
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi4g05602 4 191850051 191866305 Vivi4g05602 4 191850051 191866305 ECH