Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g05588 ATGATTAACAAATTGAAGCAAAAAAGAGCAAAAGAATCTGAATTGATGAGTCATTTGATGCACATACATGTTGCTATAGTAGCAGCTTTAACTGGTTGTGTTTCAACAGTTTTACTCATTTTCATTTGGAGGCTATGTCATCACAAGAAAGATCAAAAGAACTTCGTTGAATCAAATAGTTTGAACAAAAGAAAGAGCAGTGATTTGTTCAGTTGGTTTGATCATCCATATCTAGCTTCTGATGCTGTTGAAAATGGATGGTCAAGATTTGCTTTCACTAGCTACAAAAGTGATTATATGTCATCAAAAAAATCAACCCTTTTAGGAGCTTGTGGACGAGGAGGGAATGAATATGGAAGAGAAGAAAATGAGGTTGAGATAAGTTGGGAAGTGTGTCAAGGTTCAAATGAATTCATGCAGAAGATTAGGCTTAATCCTGGTTTGAAAAAGTGTTTTTTTTATCCAAACAATGCTTTAATGAATGCTCATTCTGTTGTTAGGACTTGTTTGCCTCTTCCTGGTCCTAGTTTAGGGAGCCATGTTTTTCCACAAGAAGCTTATTTTGAAGTTACTATATTGTATTCTTGTGGTGGAGATGATTGTGAAATGGTTGGGAGAAGAGAAGGGGAGAAGACAAAGCTGCTTATTGGAGATGGTTTGAATGATGAAGGTGATTTGAAAAGTGTTGAAGAAATGAAAGATGAAGGAAAAGATGGATCTGTGATGGTGTCATTAGGGTTGAGTTGTGGTGGAGGTGTTCCTTTGAGAGTTCCAGGAAGTTACCCTAGAAGCATAGGGTTCAACTCCAATGGTTCTGTTTTTCTTGATGGAATGAAACTTGTATATGAGTCAGACAAACCACAATGGATAGGAACTAACACAGTAATTGGTTGTGGATATGATCCAAGAAAAAAGAAAGTTTTCTTCACATTAGATTCAGAATTGGTGCATGTAATTCACTGTCAATCAGAGGAATTCAGCACACCACTCTGTCCAACAATTGCTGCAAATATCGACATTATGGTTTTAGTTAATTTCGGACAAGTTGCATTCAAATACGCGCCTGCAAATGCGCAAAGAACGCCGAATCCATGTTTCGTAGCGCCACTTGTACATTCCCCTGGTGCTACACTTGGATTTGATGACAGTAAGGAACTATTCTCCATGGGAAGGATTGATTCGCCGTGGCAGAATCGATCCACGACGAAAGGAAATAACAACGGTGGGAATAATAATAATGTAGTATTTGATTTTGATGAAGAGTCTGAAGCTGATTTGTTTGAAATTGTGTTAGATGGTTCAGAAAAATCACCATACTCAGTGTCTTTATCATAG 1335 0.3753 MINKLKQKRAKESELMSHLMHIHVAIVAALTGCVSTVLLIFIWRLCHHKKDQKNFVESNSLNKRKSSDLFSWFDHPYLASDAVENGWSRFAFTSYKSDYMSSKKSTLLGACGRGGNEYGREENEVEISWEVCQGSNEFMQKIRLNPGLKKCFFYPNNALMNAHSVVRTCLPLPGPSLGSHVFPQEAYFEVTILYSCGGDDCEMVGRREGEKTKLLIGDGLNDEGDLKSVEEMKDEGKDGSVMVSLGLSCGGGVPLRVPGSYPRSIGFNSNGSVFLDGMKLVYESDKPQWIGTNTVIGCGYDPRKKKVFFTLDSELVHVIHCQSEEFSTPLCPTIAANIDIMVLVNFGQVAFKYAPANAQRTPNPCFVAPLVHSPGATLGFDDSKELFSMGRIDSPWQNRSTTKGNNNGGNNNNVVFDFDEESEADLFEIVLDGSEKSPYSVSLS 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g05588 444 Gene3D - 120 361 IPR043136 -
Vivi4g05588 444 PANTHER IMMUNOGLOBULIN SUPERFAMILY MEMBER 5 67 195 IPR043364 GO:0098609
Vivi4g05588 444 SUPERFAMILY Concanavalin A-like lectins/glucanases 245 352 IPR013320 -
Vivi4g05588 444 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 33 - -
Vivi4g05588 444 CDD SPRY_RanBP_like 231 347 IPR044736 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g05588 Vivi-Chr4 191416710 191419146 Dispersed/Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi4g05588 4 191416710 191419146 Vivi4g05588 4 191416710 191419146 ECH
Vivi4g05588 4 191416710 191419146 Vivi3g01885 3 30744104 30746714 PCT