Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g05586 ATGATGACCTCATCGGTTCTCAATTTCGTGAACACTACATTAGATTGGGTGACATATGCTTTAGATGCTCCTTCTACCAGAGCAGTGGTTTTTGGATTCAATATCGGTGGACATTTGTTTATCGAAGTTTTTCTCTTGGTGGTTATACTTTTCTTGCTTTCCCAGAAAAGTTACAAGCCTCCTAAAAGGCCTTTGACAAACAAGGAAATTGATGAACTATGTGATGAATGGGTTCCACAACCCCTTATTCCTTCTCTTGATGAAGAGTTGCACTATGAACCACCAGTGCTGGAGAGTGCTGCTGGGCCACATACCATAGTTAACGGTAAAGATGTTGTAAATTTTGCATCAGCAAACTATCTCGGGCTGATAGGTCATCAAAAGTTACTTGACTCATGTTCGTCTGCATTAGAGAAATATGGTGTTGGTTCTTGTGGTCCCCGTGGGTTTTATGGAACAATTGATGTCCATCTTGACTGTGAAGCGAGAGTAGCGAAATTTTTAGGGACGCCTGATTCAATTCTGTACTCTTATGGACTTTCGACCATGTTCAGTGCTATTCCTGCATTCTCTAAAAAAGGAGATATAATTGTGGCAGACGAGGGAGTCCACTGGGGAATACAAAATGGCCTTTATCTTTCTAGAAGCACAGTCGTATATTTTAAGCACAATGACATGGATTCTTTAAGTAAAACTTTAGAGAACATTACTTCCAAATATAAGGGGACAAAAAATTTGAGGCGTTATATTGTCGTTGAAGCTCTCTACCAGAATTCTGGCCAAATAGCACCCTTAGATGAGATCATTAAATTGAAGGAAAAATATCGTTTTCGTATTTTATTGGATGAGAGCAACTCGTTTGGTGTACTTGGAAGTTCTGGAAGAGGTCTCACCGAACACTATGGAGTACCAGTTGAGAAATTAGATCTTATAACTGCTGCTATGGGACATGCATTGGCCACAGAAGGAGGATTCTGCACCGGAAGTGCAAGAGTTATAGATCACCAACGATTGAGTAGCTCTGGCTATGTCTTTTCTGCTTCTTTGCCTCCATATCTTGCAAGCGCTGCAATTACAGCTATTGATGTTCTTGACGAAAATCCCAATCTGCTAACAAAATTGAAGAACAACATTACTGTGTTAAGGAAAGGGTTGTCGAAAATACCAAGCTTCACAATTGCAAGTCATCCAGAATCACCAATTGTTTATTTGAGATTAAAGAAGTCAACAGGTTCCTTGAAAGATGATCTACATCTGCTTGAAAATATTGCCGAGCGTGTTTTGAAAGAAGATTCTGTATTTGTGGCAACTTCAAGAAGATCAACACTGGACAAGTGTAAATTGCCTATAGGAATTAGATTATTTGTTTCTGCAGGCCATGAAGAGTCTGATCTTCACAAAGCATCTGAATCATTGGAAAGGGTTGCCGCATTAGTCCTCGGCAATCGTAATTGA 1455 0.3979 MMTSSVLNFVNTTLDWVTYALDAPSTRAVVFGFNIGGHLFIEVFLLVVILFLLSQKSYKPPKRPLTNKEIDELCDEWVPQPLIPSLDEELHYEPPVLESAAGPHTIVNGKDVVNFASANYLGLIGHQKLLDSCSSALEKYGVGSCGPRGFYGTIDVHLDCEARVAKFLGTPDSILYSYGLSTMFSAIPAFSKKGDIIVADEGVHWGIQNGLYLSRSTVVYFKHNDMDSLSKTLENITSKYKGTKNLRRYIVVEALYQNSGQIAPLDEIIKLKEKYRFRILLDESNSFGVLGSSGRGLTEHYGVPVEKLDLITAAMGHALATEGGFCTGSARVIDHQRLSSSGYVFSASLPPYLASAAITAIDVLDENPNLLTKLKNNITVLRKGLSKIPSFTIASHPESPIVYLRLKKSTGSLKDDLHLLENIAERVLKEDSVFVATSRRSTLDKCKLPIGIRLFVSAGHEESDLHKASESLERVAALVLGNRN 484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g05586 484 Pfam Aminotransferase class I and II 110 472 IPR004839 GO:0009058|GO:0030170
Vivi4g05586 484 SUPERFAMILY PLP-dependent transferases 82 475 IPR015424 -
Vivi4g05586 484 Gene3D Aspartate Aminotransferase, domain 1 105 470 IPR015422 GO:0003824
Vivi4g05586 484 Gene3D - 126 367 IPR015421 GO:0003824
Vivi4g05586 484 PANTHER CLASS II AMINOTRANSFERASE/8-AMINO-7-OXONONANOATE SYNTHASE 37 475 - -
Vivi4g05586 484 FunFam serine palmitoyltransferase 1 isoform X1 126 367 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g05586 Vivi-Chr4 191408675 191415706 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g05586 2 336 Acyl Lipid Metabolism Gene Families AT4G36480 77.313 0.0 566