Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g05582 ATGATGAATAGCATCTTTGCAAAACTATTATTCTCAACTTTGTGCATGCTCTTTGTCCTCAAAGCACAATCTTTAATATTTGCAGACCAAAGACTAGCCATAGTCTATCCAGTGATCCAAAACTTCAAGTCCTTGATCACTTCAGATCCATTAGGTGTTACAAAATCATGGACAGGTTCTGATATATGCAACTACAAAGGCTTCTACTGTGATAATCCACCAGATAACACCTCAGCTATTGCTTTAGCTTCTATTGATTTCAATGGCTTTCATCTTAGTGCTTCAACGCTCGATGGCTTTATCGATAAACTTCCTGATATCGCTCTTTTTCATGCAAATTCTAATAATTTCATTGGCACAATCACTTCTAAGATCACCAAACTTCCTTATCTTTATGAGCTTGATTTAAGCAATAACCAATTTTCAGGTCCTTTTCCAATGGCTGTTCTTGGTATGAACAGTTTAACTTTCTTGGATATAAGGTTCAATTTCTTCTCTGGTGGAGTTCCACAGCAGATCTTCACACAAAACCTTGAGATTCTTTTCATCAATGACAATCTTCTCACTCAAAAGTTACCTGAAAATTTAGCTTCAAGTTCAATATTCTTGCTCACTTTGGCTAACAATAAATTCGTCGGGCCGATACCGAGGGATCTTCCGAAGGCTTTGTCGGGTTTAACCGAAGTTGTTTTACTAAACAATGAATTAACAGGCTGTTTGCCTCATGAGATAGGTTATTTTCAAGAGGCTGTAGTTTTTGATGTTGGAAATAATCAACTTACTGGTCCTTTACCATTTTCTCTAAGCTGTCTTGAGAAAGTTGAGGTTGTTAATTTGGCTGGTAACATGTTTTATGGAATTGTTCCTGAGATTGTGTGTGCAGGATGTTGA 891 0.3692 MMNSIFAKLLFSTLCMLFVLKAQSLIFADQRLAIVYPVIQNFKSLITSDPLGVTKSWTGSDICNYKGFYCDNPPDNTSAIALASIDFNGFHLSASTLDGFIDKLPDIALFHANSNNFIGTITSKITKLPYLYELDLSNNQFSGPFPMAVLGMNSLTFLDIRFNFFSGGVPQQIFTQNLEILFINDNLLTQKLPENLASSSIFLLTLANNKFVGPIPRDLPKALSGLTEVVLLNNELTGCLPHEIGYFQEAVVFDVGNNQLTGPLPFSLSCLEKVEVVNLAGNMFYGIVPEIVCAGC 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g05582 296 Pfam Leucine rich repeat N-terminal domain 40 71 IPR013210 -
Vivi4g05582 296 SUPERFAMILY L domain-like 38 293 - -
Vivi4g05582 296 Gene3D Ribonuclease Inhibitor 37 199 IPR032675 -
Vivi4g05582 296 Gene3D Ribonuclease Inhibitor 200 294 IPR032675 -
Vivi4g05582 296 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 23 294 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g05582 Vivi-Chr4 191339269 191340489 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g05582 24 293 Leucine-rich Repeat extension Gene Families AT3G24480 44.444 5.22e-72 228
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi4g05582 4 191339269 191340489 Vivi4g05582 4 191339269 191340489 ECH