Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g05571 ATGGGTGGTTGGGCTATTGCTGTGCATGGTGGTGCTGGTGTTGACCCCAACCTCCCTCTCCAACGTCAAGAAGAAGCCAAACAACTTCTCACTCGTGTTCTCAATCTCGGCATCTCTGCTCTTCGTTCCAATCTTCCCGCCATCGATGTTGTCGAACTTGTGGTGAGGGAATTGGAAACGGATCCACTATTCAATTCGGGTTGTGGATCTGCCCTGACGGCGAAAGGAACTGTGGAAATGGAGGCTAGCATAATGGACGGTCCAAAACGACGATGCGGTGCCGTTTCAGGATTAACCACCGTTAAGAATCCTATTTCACTGGCACGGTTGGTTATGGACAAATCTCCTCATTCCTATCTTGCTTTTGATGGTGCTGAAGATTTTGCTAGACAACAGGGTGTGGAGGTTGTCGACAATGAATACTTTATCACTGCTGACAATATTGGCATGCTTAAGCTGGCAAAGGAGGCAAATACAATTCTGTTTGATTATCGAATTCCATCCTCCGGATGTGGTGCAGGAGTTGAAAGTCCATTGAAAATGAATGGACTTCCAATGAGTGTTTACGCGCCTGAGACAGTCGGATGCGTAGTTGTTGACCGCGAAGGAAGATGTGCTGCTGCCACGTCCACTGGTGGACTAATGAACAAGATGGTGGGTCGAATCGGTGACTCGCCACTCATCGGTGCAGGTACTTATGCATGTAAACTTGCTGGTGTATCATGCACTGGCGAAGGCGAGGCTATTATTCGCGGGACTTTGGCACGCGAGGTCTCGGCTGTTATGGAATACAAAGGACTTGGTCTTCAAGAGGCAGTGGATTATGTGATTAAGAATCGGTTGGATGAAGGAATGGCCGGACTGATTGCGGTTTCGAGTAAAGGTGAAGTTGCTTATGGATTTAACTGCAATGGTATGTTTAGAGGATGTGCTTCTGAGAATGGGTTTATGGAAGTTGGAATTTGGGAGTGA 972 0.4763 MGGWAIAVHGGAGVDPNLPLQRQEEAKQLLTRVLNLGISALRSNLPAIDVVELVVRELETDPLFNSGCGSALTAKGTVEMEASIMDGPKRRCGAVSGLTTVKNPISLARLVMDKSPHSYLAFDGAEDFARQQGVEVVDNEYFITADNIGMLKLAKEANTILFDYRIPSSGCGAGVESPLKMNGLPMSVYAPETVGCVVVDREGRCAAATSTGGLMNKMVGRIGDSPLIGAGTYACKLAGVSCTGEGEAIIRGTLAREVSAVMEYKGLGLQEAVDYVIKNRLDEGMAGLIAVSSKGEVAYGFNCNGMFRGCASENGFMEVGIWE 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g05571 323 Gene3D (Glycosyl)asparaginase 193 323 - -
Vivi4g05571 323 PANTHER L-ASPARAGINASE 4 309 IPR000246 GO:0016787
Vivi4g05571 323 FunFam Isoaspartyl peptidase/L-asparaginase 193 323 - -
Vivi4g05571 323 Pfam Asparaginase 4 322 IPR000246 GO:0016787
Vivi4g05571 323 SUPERFAMILY N-terminal nucleophile aminohydrolases (Ntn hydrolases) 4 320 IPR029055 -
Vivi4g05571 323 CDD Asparaginase_2 5 315 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g05571 Vivi-Chr4 191114583 191116625 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g05571 6 283 Miscellaneous Gene Families AT4G00590 25.161 3.80e-14 70.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi4g05571 4 191114583 191116625 Vivi4g05571 4 191114583 191116625 ECH
Vivi4g05571 4 191114583 191116625 Vivi3g01870 3 30221255 30222646 PCT