Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g05555 ATGGACCCTGTAACCGCAACTTGTCTTTTATTCACTCTAACGGCTGGCCTTCTTATTTTCTACATCGTTTCTAATCTTGTTTCCATAGCAACCACCGACAAAAACACAACAGCAAAACATCATGATCAGAAACCACCGGTTGGTCCGGTTCTTCAGCGCTTGGCGGTTCAGTCACCTCAAACCAAGAGCCGAGTTGGTTTTGTTAAACCGGTTCAACTAACAATTACATCAACGACAACAACTAGTTTAGAAACCGAAGACGCTATCGTGAATTCCGATTCCGAAGTTGATGTCGAATTGCCACCGACAAAGTCAAACATTGACAAAACTGTTGCTAAGGTTAAATCCGATTCCGACGTTGTTGAATATTTGCAGGAAACCGTCGTGAAAAGTGGCGATTCTACTGAAGAGAAGAGCATTGAGTATGTGGAAGAAACCACCGGAGAAAGTTCCGGTGAGAAGTTAGTTTCTGTTGTGGTGAACGAAGGAGAGGAAAATGATGATGAAGATTGGGAATGGGAAGGGATTGAGAGGAGTGAGGTGGAAAAGACGTTTATGGAGGCTGTGGAATTTGTTGCTGAGAAAGGGTATATTGGTAAATGCGATGATGATTTGGAGATGGAGTTGTATGGACTTGAGAGAGTTGTTATTGAAGGACCTTGCCGTGAGCCTCAACCAATGCCGCTTAAACTCTCCGCACGTGCTAAATGGAATGCTTGGCAAAAGCTGGGGAACATGAGTCCAGAGGTTGCGATGGAGCAATACATCAGCCTTCTTTCCGATAAATTTCCTGGATGGATGAAAAATACTTCTACCGGAATGAGTGAAGGTGAACCATCACGATCAGAAGTTTCAGAGTCTGCTGCTCCTGATTCGAGCTCAGCTTTGTCTCATCAACAAGCAATCTTAGCAGAAAGGAAACTTGTTCGAGAATCTAAGTCTGGTGCCCAGGAGCTTATCCCATATGCAGAGTCAGATTCCGAGAACAATTTTCAGGTTAAAAACTGA 1008 0.4385 MDPVTATCLLFTLTAGLLIFYIVSNLVSIATTDKNTTAKHHDQKPPVGPVLQRLAVQSPQTKSRVGFVKPVQLTITSTTTTSLETEDAIVNSDSEVDVELPPTKSNIDKTVAKVKSDSDVVEYLQETVVKSGDSTEEKSIEYVEETTGESSGEKLVSVVVNEGEENDDEDWEWEGIERSEVEKTFMEAVEFVAEKGYIGKCDDDLEMELYGLERVVIEGPCREPQPMPLKLSARAKWNAWQKLGNMSPEVAMEQYISLLSDKFPGWMKNTSTGMSEGEPSRSEVSESAAPDSSSALSHQQAILAERKLVRESKSGAQELIPYAESDSENNFQVKN 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g05555 335 Gene3D - 176 282 IPR014352 -
Vivi4g05555 335 Pfam Acyl CoA binding protein 182 259 IPR000582 GO:0000062
Vivi4g05555 335 SUPERFAMILY Acyl-CoA binding protein 181 267 IPR035984 GO:0000062
Vivi4g05555 335 PANTHER ACYL-COA-BINDING PROTEIN, ACBP 9 315 - -
Vivi4g05555 335 ProSiteProfiles Acyl-CoA-binding (ACB) domain profile. 181 268 IPR000582 GO:0000062
Vivi4g05555 335 MobiDBLite consensus disorder prediction 269 299 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g05555 Vivi-Chr4 190790891 190794203 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g05555 137 294 Acyl Lipid Metabolism Gene Families AT4G24230 47.468 2.76e-37 135
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi4g05555 4 190790891 190794203 Vivi4g05555 4 190790891 190794203 ECH