Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g05536 ATGGGAACGGAGAGTTATACCTATATGGGACGGAGTTTCAACGAATTCACCATCAACGACGATTCTACTTCCTCCGCTTTCAGCGACTGTAACAGTGATAGATCCGGCGAATTCGCCACCACTTCTTCTCAATCCCGACGACTCATTATCGCCTGCGCTTCGGAAGATTCCGATGATCTCATCCGTCAACTCGTATCCGATCTTCACTCCTCTTCAATCGAAGAACAGAAACAAGCCGCCATGGAAATTCGGTTAATCGCGAAGAATAAACCGGAAAATCGAATCAAAATCGCGAAAGCCGGTGCGATTAAACCTTTAATTTCACTCGTGTCTTCACAAGATCTTCAGCTTCAAGAATACGGCGTCACTGCAATTTTGAATCTCTCTTTATGCGACGAGAATAAAGAGCTTATAGCTTCAGCCGGAGCGATTAAGCCGTTAGTTAGAGCGTTAAACTCAGGAACTTCAACTGCGAAAGAGAACGCAGCCTGCGCGTTACTTCGTCTCGCGCAAGTGGAAGGGAACAAAGCGGCGATTGGAAGATCCGGTGCTATTCCGTTACTAGTGAACCTTCTAGGAAGCGGCGGAATCCGCGGGAAGAAAGACGCGTCAACGGCGCTGTACACGCTTTGCACGGTAAAGGAGAACAAGATGAGAGCGGTGAAAGCGGGGATTATGAAGGTTTTGGTTGAATTGATGGCGGATTTTGAATCGAATATGGTGGATAAATCAGCGTACGTTGTGAGTGTTTTGGTGTCGGTGCCGGAAGCAAAGACGGCACTGGTGGAGGAAGGTGGCGTTCCGGTGTTGGTGGAGATCGTGGAAGTTGGATCTCAGAGACAGAAAGAAATCGCGGCGGTTATTCTGTTACAGATTTGTGACGACAACATGACGTATCGAACCATGGTGGCTCGTGAAGGTGCCATTCCTCCTTTGGTTGCATTGACGCAATCCGGCACTAATCGCGCAAAACAAAAGGCTGAGAAACTAATTGAGCTTCTGAGGCAGCCAAGATCTACACGTAGTACATCAGAAATAGTACTAGCATAG 1050 0.4781 MGTESYTYMGRSFNEFTINDDSTSSAFSDCNSDRSGEFATTSSQSRRLIIACASEDSDDLIRQLVSDLHSSSIEEQKQAAMEIRLIAKNKPENRIKIAKAGAIKPLISLVSSQDLQLQEYGVTAILNLSLCDENKELIASAGAIKPLVRALNSGTSTAKENAACALLRLAQVEGNKAAIGRSGAIPLLVNLLGSGGIRGKKDASTALYTLCTVKENKMRAVKAGIMKVLVELMADFESNMVDKSAYVVSVLVSVPEAKTALVEEGGVPVLVEIVEVGSQRQKEIAAVILLQICDDNMTYRTMVAREGAIPPLVALTQSGTNRAKQKAEKLIELLRQPRSTRSTSEIVLA 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g05536 349 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 101 143 IPR000225 GO:0005515
Vivi4g05536 349 FunFam U-box domain-containing protein 4 45 349 - -
Vivi4g05536 349 Pfam Armadillo/beta-catenin-like repeat 91 129 IPR000225 GO:0005515
Vivi4g05536 349 Pfam Armadillo/beta-catenin-like repeat 174 211 IPR000225 GO:0005515
Vivi4g05536 349 Pfam Armadillo/beta-catenin-like repeat 132 170 IPR000225 GO:0005515
Vivi4g05536 349 Gene3D - 253 335 IPR011989 -
Vivi4g05536 349 SMART arm_5 296 336 IPR000225 GO:0005515
Vivi4g05536 349 SMART arm_5 172 212 IPR000225 GO:0005515
Vivi4g05536 349 SMART arm_5 131 171 IPR000225 GO:0005515
Vivi4g05536 349 SMART arm_5 213 253 IPR000225 GO:0005515
Vivi4g05536 349 SMART arm_5 254 294 IPR000225 GO:0005515
Vivi4g05536 349 SMART arm_5 90 130 IPR000225 GO:0005515
Vivi4g05536 349 PANTHER U BOX DOMAIN-CONTAINING 60 335 - -
Vivi4g05536 349 SUPERFAMILY ARM repeat 56 333 IPR016024 -
Vivi4g05536 349 Gene3D - 37 252 IPR011989 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g05536 25 338 U-box Gene Family AT2G23140 46.914 1.31e-85 269
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi4g05536 4 190401508 190403369 Vivi4g05536 4 190401508 190403369 PCT