Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g05521 ATGGCGAACAATCTCAACGACTCTTCATCTTCCTGTTCATTTTCATTCAGCGATTTCCCCGAAGATGTTCAGCTTTGCATCCTCTCGTTTCTCGGCCCCACCGAGATCGCTTCGTTCGCATGCACCTCGAAGCAATTCGGTTCACTCTGCTCCAACGACGCTAAGCTATGGTTCACGCTTTGCGATCGAAGGTGGGGTTCGAAAACCCAAATCGCAAAATGGGGTGAAGGGAAAATTCCGTATAAAGTTCTTTACAATACTCTTCATGAATGGGATAATCTCATTGGTTTCTGGCGGAGAAGCGGTCCCGGAAGCGCTGTGATTTCGTCGCCTTCGTTGGTTTTCTTTGAGTGGGGGAATTCGTTCATTTCGGGTTTTAGGGTTTCGCCTGTTGAATCGCAATCTGAGATTTGTGGTTATCAGGTTAAAAAGGTACCGTTTTTGAAGATGGGTATTTCTGAAGAGGGGCAAAGTGTGAATCTTTTGGATCCTGATGGTAGAGCTGACTTGAATTTGAATTTGAATTTTGGGGATGGGAATGAATTGAATGAGTTGATTCCTGTGAATGTTTGTTTTATGGGGAAAACTCATTTTGTTTTGGAGGAGAATGTGTTTGGGAAAAATTCGAGTCCGGTACATGTTACCGGTGAGGATTGTGGTTTTTTTGGAGAGGATGGGATTGGGGTTGGGAGTGGATCTCCGCCGGATCTGTTGATGTTGGAGATTTATCAGCATTTGGCGAACCGGACTAGTCCTGGAAGTGACAGATCGAGGAGGCAGAGGAGGAAGGAGAAGGGAAGGATGGCTAGGAGGAAATGGGAGCCTGAGCATTTTGTCAAGATTGTGAATTGCTCGCCGACAGCGTTGCGGCCTTTGCAAGGCCTTTGGAAGGGAATTTGCGCTGACATGAGTTTAGCATTTTACCTTGTGGCTTATGATGACATTGGTGGCATTGCTTGCCGTCGGCTTGGAGATCCTCCTCAACGTTTCTCAACTTATGCTCCAGTTTTCTGGACGTCTAATGCTACATTTATGGAATCTCCCTTTCCTCTAGAGGAAGAATCTCTGTATGGCAGCCGCATTCATCTACAACCGGTTCAACCACACAATGAAAATCACGAGCAGTTCCCTATGTCGGACATTGAAGGGGAAAATCACATTCAGCAGGTCCATTTGTCCGACAATGAAGTGGTGAATCGAATTCTTCTCATAAATGCAAGTTATGATTTAGTTATTCCTGACCTTGTTGCTGAAACAATAAATCCAAGGAGTGCCGAGGGAAGGATTTGGCAGTACCAGGATGGCACTTTTGGATTTGGATTTGTTCGCGACAATTTTGTCATAGACATGAAAAATATTGTCTGTGATGGTTGTATCATTGATGCAGTAAACCCTTCTGCCGGTTAA 1407 0.4506 MANNLNDSSSSCSFSFSDFPEDVQLCILSFLGPTEIASFACTSKQFGSLCSNDAKLWFTLCDRRWGSKTQIAKWGEGKIPYKVLYNTLHEWDNLIGFWRRSGPGSAVISSPSLVFFEWGNSFISGFRVSPVESQSEICGYQVKKVPFLKMGISEEGQSVNLLDPDGRADLNLNLNFGDGNELNELIPVNVCFMGKTHFVLEENVFGKNSSPVHVTGEDCGFFGEDGIGVGSGSPPDLLMLEIYQHLANRTSPGSDRSRRQRRKEKGRMARRKWEPEHFVKIVNCSPTALRPLQGLWKGICADMSLAFYLVAYDDIGGIACRRLGDPPQRFSTYAPVFWTSNATFMESPFPLEEESLYGSRIHLQPVQPHNENHEQFPMSDIEGENHIQQVHLSDNEVVNRILLINASYDLVIPDLVAETINPRSAEGRIWQYQDGTFGFGFVRDNFVIDMKNIVCDGCIIDAVNPSAG 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g05521 468 Pfam F-box domain 16 53 IPR001810 GO:0005515
Vivi4g05521 468 ProSiteProfiles F-box domain profile. 13 60 IPR001810 GO:0005515
Vivi4g05521 468 ProSitePatterns Neurotransmitter-gated ion-channels signature. 12 26 IPR018000 -
Vivi4g05521 468 Gene3D - 3 95 - -
Vivi4g05521 468 SUPERFAMILY F-box domain 10 91 IPR036047 GO:0005515
Vivi4g05521 468 PANTHER F-BOX ONLY PROTEIN 48-RELATED 12 296 IPR045118 GO:0019005|GO:0031146
Vivi4g05521 468 SMART fbox_2 19 60 IPR001810 GO:0005515
Vivi4g05521 468 MobiDBLite consensus disorder prediction 249 269 - -
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi4g05521 4 190127859 190130179 Vivi4g05521 4 190127859 190130179 ECH