Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g03837 ATGAGGGTATGGAAAAGAGCTACGGGAGTTTTAAAAGATAGATGCAGCATTTTGGCTGCAAAACTTTCACCCTATGGAGCATGTAGAAACCCTGATCTTGAAACTGTTGTTATAAAAGCAACAAGCCATGATGAGCATGGTATGGATTATAAGAATGTTCAAAAAGTTTTTCAATGGCTAAGAACATCACCTATATACCTTAAACCACTTTTATGTGTACTTTCAATTAGAATGACAAGGACAAGTAATTGGGTTGTAGCACTCAAGGGTTTAATGTTAATTCATGGTATTTTTTGTTTTGACATACCAATGGTTCAAAAAATGGGAAGGTTACCGTTTGATTTATCGCAATTTAGCGACGGACATTTAAGTCCTGAAAAAGGTTGGGTTTTCAACACTTTTATTCGGTCTTATTTTGCGTATTTAGATCACCGCTCGGTGAACTCGAGAAATGATGCAAAGAAATTACAAAACAAAAAAGGGAAGGAATGCGAAGAAGCAACATTGCTCGAAGAGTTGAATAATTTAGCGGAGTTACAAAAAACGATAGACATGTTGATGCAAATAAAACCTAGGAGTGATGTGAACATGAATGTTGTTCTAATTCTTGAAGCAATGGATTGTGTGATAGATGAGATTGTTGATGTTTATGGTAAATTTAGCAAAGAGATTAATCGCGTGTTGTTAAGGGTTTGTGACATTGGTGGAAAAGAAGAAGCAAGTATTGGTTTTGATATAGCAAGAAAAACTAAATCACAAGGTGAAAAACTAACTATGCATTTTGAGTTTTGTAAAGAGATAGGTGTTCTTAACAATTGTGTGTGTCCAAAAATTGTGGAAATTGATGAAGAGGAAGTTGAAGAGTTAAAGAAAATAATGAATGGTGGTGAAGAGAAAGCTATTGTGGTTAGAGATAATTCTAAGCAAGTGGAGATTAATGGCTTAATGACAGTGGTTACAGATCATTGGGAGGTTTTTCTTGATGATGTTATTGTTGATGTTGAAAAACAACATAATTCTAATGGTACATTAACCATTGTTGATCCTAATAATCCTTTTGTGGATGAAACTTTTAGCATTGTTCCTTATAATCCTGTTCAACATTATGATTTACCAGATCTAATTAGTTTGTAG 1134 0.3395 MRVWKRATGVLKDRCSILAAKLSPYGACRNPDLETVVIKATSHDEHGMDYKNVQKVFQWLRTSPIYLKPLLCVLSIRMTRTSNWVVALKGLMLIHGIFCFDIPMVQKMGRLPFDLSQFSDGHLSPEKGWVFNTFIRSYFAYLDHRSVNSRNDAKKLQNKKGKECEEATLLEELNNLAELQKTIDMLMQIKPRSDVNMNVVLILEAMDCVIDEIVDVYGKFSKEINRVLLRVCDIGGKEEASIGFDIARKTKSQGEKLTMHFEFCKEIGVLNNCVCPKIVEIDEEEVEELKKIMNGGEEKAIVVRDNSKQVEINGLMTVVTDHWEVFLDDVIVDVEKQHNSNGTLTIVDPNNPFVDETFSIVPYNPVQHYDLPDLISL 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g03837 377 Gene3D ANTH domain 153 308 IPR014712 GO:0005545|GO:0030136|GO:0030276|GO:0048268
Vivi4g03837 377 Coils Coil 162 182 - -
Vivi4g03837 377 Pfam ANTH domain 32 293 IPR011417 GO:0005543
Vivi4g03837 377 SUPERFAMILY GAT-like domain 171 294 - -
Vivi4g03837 377 FunFam Putative clathrin assembly protein 7 153 - -
Vivi4g03837 377 CDD ANTH_N_AP180_plant 33 146 - -
Vivi4g03837 377 Coils Coil 279 299 - -
Vivi4g03837 377 Gene3D - 4 152 IPR008942 -
Vivi4g03837 377 SUPERFAMILY ENTH/VHS domain 32 150 IPR008942 -
Vivi4g03837 377 ProSiteProfiles ENTH domain profile. 25 156 IPR013809 -
Vivi4g03837 377 PANTHER CLATHRIN ASSEMBLY PROTEIN 4 304 IPR045192 GO:0048268|GO:0072583
Vivi4g03837 377 SMART enth_2 31 160 IPR013809 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g03837 Vivi-Chr4 157639129 157640262 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi4g03837 4 157639129 157640262 Vivi4g03837 4 157639129 157640262 ECH