Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g02575 ATGAGGGCGATTGAACTTATTCAAACATGGATGGAAGATGCTGGTTTGAGAACTTGGGTGGACCAGATGGGAAATGTGCACGGTAGAGTCGAGGGTGCAAATGCAAATACAGAAGCTTTATTGATTGGATCTCACATGGACACTGTTGTTGATGCTGGTAAATTTGATGGATCACTAGGAATAGTCTCTGCAATATCTGCATTAAAGGTTATGCATGTCAATGGAAAGCTGCAAAGTCTAAGGCGTCCTGTTGAGGTGATTGCATTTTGTGATGAAGAGGGTGTGAGATTTCAAACTACTTTCTTAGGAAGCGGGGCTATAGCTGGTATTTTACCTGCTACGACATTGGGGATAACTGATAAGAGGAATGTAACGATAAAAGAGGTTCTTAAAGAGAACTCAATAGAAGCCGCGGAGGAAATGTTTTCACAGCTCAAGTATGATCCAAAATCCGTTTGGGGTTATGTCGAGCTTCACATTGAGCAGGGTCCTGTGCTAGAACAAGTTGGTTTCCCACTTGGTGTTGTTAAAGGCATAGCTGGACAGACACGATTGAAAGTTACGGTTAAAGGCTCACAAGGTCATGCCGGAACTGTTCCAATGTCCATGCGCCAGGATCCTATGGTGGCAGCTGCTGAACAAATTGTACTTATGGAAAGTCTCTGCAAACATCCCGAAGAATACCTTTCTTTTGATGGTCATTGCAGCGATTCATCGATAAAATCACTTTCAAGTTCACTTGTTTGTACTGTTGGTGAAATATCAACATGGCCAAGTGCTAGTAATGTCATTCCCGGCCAGGTTACATATACAGTCGATATACGAGCAATTGATGATCTCGGGCGCGAGGCTGTTATCTACGATTTATCCAATCGAATTTACCAGATATGTGACAAGCGTTCGGTTTCCTGCCTTATTGAACACAAGCATGATGCAGGTGCTGTGATTTGTGATTCTGAACTAACCTCACAGCTGAAGTCTGCAGCTTATTCTGCACTCAAGAGAATGGAGAGTGACATTCAAGATGAAGTACCAACATTAATGAGTGGAGCAGGGCATGATGCCATGGCAATGTCTCGCTTAACAAAGGTGGGAATGCTATTTGTGCGCTGTCGCGGAGGCATAAGTCACTCTCCACAAGAGGATGTGTTAGACGACGATATTTGGGCGGCCGGTTTAGCAACCTTATCATTTCTGGAAAATCTATGA 1209 0.4359 MRAIELIQTWMEDAGLRTWVDQMGNVHGRVEGANANTEALLIGSHMDTVVDAGKFDGSLGIVSAISALKVMHVNGKLQSLRRPVEVIAFCDEEGVRFQTTFLGSGAIAGILPATTLGITDKRNVTIKEVLKENSIEAAEEMFSQLKYDPKSVWGYVELHIEQGPVLEQVGFPLGVVKGIAGQTRLKVTVKGSQGHAGTVPMSMRQDPMVAAAEQIVLMESLCKHPEEYLSFDGHCSDSSIKSLSSSLVCTVGEISTWPSASNVIPGQVTYTVDIRAIDDLGREAVIYDLSNRIYQICDKRSVSCLIEHKHDAGAVICDSELTSQLKSAAYSALKRMESDIQDEVPTLMSGAGHDAMAMSRLTKVGMLFVRCRGGISHSPQEDVLDDDIWAAGLATLSFLENL 402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g02575 402 CDD M20_bAS 1 400 - -
Vivi4g02575 402 ProSitePatterns ArgE / dapE / ACY1 / CPG2 / yscS family signature 1. 40 49 IPR001261 -
Vivi4g02575 402 PANTHER ALLANTOATE DEIMINASE-RELATED 2 400 IPR010158 GO:0016813
Vivi4g02575 402 NCBIfam hydantoinase/carbamoylase family amidase 3 226 IPR010158 GO:0016813
Vivi4g02575 402 Gene3D - 181 313 - -
Vivi4g02575 402 Pfam Peptidase dimerisation domain 181 292 IPR011650 -
Vivi4g02575 402 PIRSF Amidase_hyd_carb 1 402 IPR010158 GO:0016813
Vivi4g02575 402 Gene3D Zn peptidases 2 392 - -
Vivi4g02575 402 SUPERFAMILY Bacterial exopeptidase dimerisation domain 181 313 IPR036264 -
Vivi4g02575 402 FunFam Allantoate deiminase 181 313 - -
Vivi4g02575 402 Pfam Peptidase family M20/M25/M40 41 391 IPR002933 GO:0016787
Vivi4g02575 402 SUPERFAMILY Zn-dependent exopeptidases 2 402 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g02575 Vivi-Chr4 124899327 124903294 Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi4g02575 4 124899327 124903294 Vivi4g02575 4 124899327 124903294 ECH