Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi485g00005 ATGGTGAAAATCACTGAAGAAACCAACCTATCTGATCAACAAGAAGTGGAAGAAGAAATAGATTATGATGAGCTGAAGAAACGCATGTGGAAGGACAAAATCCTACTACAGAAGCTAAAGGAGAAAGGCAAGAAACAAGAACAAAACCAGCAAGCAAAAGATGAAGCATCGAGACGAAAGAAGATGTCAAGAGCACAAGATTCAATCCTGAAATATATGATGAAGATTATGACAATATGCAAAGCTCAAGGTTTTGTCTATGGTATTATCCCAGAGAATGGAAAACCAGTGACAGGTTCTTCAGAAAGCTTGCGTGAGTGGTGGAAAGAACAAGTCAAGTTCAGTCAAAAAGCACCAGAAGCAGTTTCCAAATACTTATTATTACCACCACCACCACCACTCTTAGAAAATCAACAAGATTCAATTTCATCATACATGCATTTACTTTATGAGTTACAAGATACTACTTTAGGTTCACTACTTTCAGCTCTCATGCAACACTGTGTGCCACCACAAAGAAGGTTCCCTCTTGAAAGAGGTTTGGCTCCTCCTTGGTGGCCAAATGGCAAAGAACAGTGGTGGGGTCAACAAGGTTTTATGGCAGAAAAACAAGGTCCACCACCTTATAGAAAGCCTCATGATTTGAAAAAGGGTTGGAAGGTTTCTGTGTTGGCTGCAATCATCAAACACTTGTCTCCTGATGTTGATAAAGTTAGAAGGCTAGTGACTCAGTCCAAGACTTTGCAAGATAAGATGACTGCTAAAGATAGTGCAACTTGGTGCAAAGTTATGAACCAAGAACAAGCTTTGCTTTCAGAAATCACTAGAAAGTGTCTCAAGATATCAGAAGATGGTGAAAGCTCTAGTAGTGTTGTTACACATGTTTTGAATGAGAAGAGGAAGAGTGAGTTTGGTTTTGATTTTGATGTTGACTTTGATAAGATGTATTCATGTCAATATGCTGAGTGTCCACAAAGTGAGCTGTGTATGGGATTTTCAGACAAGAGTTCAAGGGTGAATCATGAATCCTTCTGTTCTTACAGATCAGGACAAGGTCATGTTCCTTTCCATGATTATCTGTCAGATGATTGGTTTAATATGGATATAGCAGGAACTAGTAATCAGAATCAGGATCATGGAAGCCTCGTTGGGAATGTTAATGAGTTGAGAGAGATTGTGGATAGGACAGTAGAAGGTTATGGTGAATTTTGGCTTAATGGCATGCAAGATCTTGAATTGCACATGGGAGTAAACATGCAAAGAGATAATGTGGACTTGAATCAAAATCAAGAACAAGATACCACATTAAGTCACGAAGAAACCTCAATTTGGGACTTGACATACCATTAG 1350 0.3889 MVKITEETNLSDQQEVEEEIDYDELKKRMWKDKILLQKLKEKGKKQEQNQQAKDEASRRKKMSRAQDSILKYMMKIMTICKAQGFVYGIIPENGKPVTGSSESLREWWKEQVKFSQKAPEAVSKYLLLPPPPPLLENQQDSISSYMHLLYELQDTTLGSLLSALMQHCVPPQRRFPLERGLAPPWWPNGKEQWWGQQGFMAEKQGPPPYRKPHDLKKGWKVSVLAAIIKHLSPDVDKVRRLVTQSKTLQDKMTAKDSATWCKVMNQEQALLSEITRKCLKISEDGESSSSVVTHVLNEKRKSEFGFDFDVDFDKMYSCQYAECPQSELCMGFSDKSSRVNHESFCSYRSGQGHVPFHDYLSDDWFNMDIAGTSNQNQDHGSLVGNVNELREIVDRTVEGYGEFWLNGMQDLELHMGVNMQRDNVDLNQNQEQDTTLSHEETSIWDLTYH 449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi485g00005 449 SUPERFAMILY DNA-binding domain of EIN3-like 146 271 IPR023278 GO:0003700|GO:0005634
Vivi485g00005 449 Gene3D - 139 278 IPR023278 GO:0003700|GO:0005634
Vivi485g00005 449 Gene3D - 51 127 IPR023278 GO:0003700|GO:0005634
Vivi485g00005 449 Coils Coil 35 55 - -
Vivi485g00005 449 FunFam Ethylene insensitive 3-like 1 140 278 - -
Vivi485g00005 449 MobiDBLite consensus disorder prediction 41 63 - -
Vivi485g00005 449 PANTHER ETHYLENE INSENSITIVE 3-LIKE 2 PROTEIN 4 407 IPR006957 GO:0003700|GO:0005634
Vivi485g00005 449 Pfam Ethylene insensitive 3 23 267 IPR047091 GO:0003700
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi485g00005 1 446 EIL Transcription Factor Family AT5G10120 47.648 3.49e-135 395
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF EIL Vivi485g00005 EIN3 3.6e-110 No_clan