Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g07843 ATGAATCCTAAGGTTGGTAATGGTGCTGTCACTTACCCTTCAAAGGGAGAGTCCTCAAACAATCCAAGAAAAGAAAAGGGAAAAGAAGTAGATGATGAAGAAAAAGAGCTAACTATTGAGGATCTTGAGACAAGGATATGGAGAGATAAAATGCTTTTAAGGAAGATGAAGGAAGAGAGAAGACAAGGTGACAAATGCAAATCATATGAACAATTGAAAAGAAAGACAATGACCCGTGCACAAGATGGTATCTTAAGGCACATGCTAAAGATGATGGAAGCTTGTGATGTCCGCGGCTTCATTTATGGAATAGTACCGGAGAATGGAAAACCAATGAGTGGTTCTTCGGACAATCTCCGAGGTTGGTGGAAAGAAAGAGTGAAATTCGACCGAAACGGCCCTGCTGCGATTGCAAAGTATGAAGAGGAAAGTGGAATTTCAAAAATGAAGGAAATGTTGAATGGTGATTCACCAACGCCTTACTCATTGCTCGAACTACCTGATACAACATTAGGTTCGCTTTTATCATCGCTAATGCAACATTGTGAGCCACCGCAGAGAAGGTTTCCGTTGGAGAGAGGAATTTATCCTCCGTGGTGGCCAACCGGGAGAGAATCATGGTGGAACGAAATGGGATTTAGTGAAGATCCCGGTCCACCTCCGTATAGAAAGCCGCATGATTTGAAGAAAGCTTGGAAGATTTGTGTTCTGCACGCTGTGATTAAACATATATCTCCTAATATTCAGAAGATTAAGAATGTTGTTAGACATTCGAGGAGTTTACAAGATAAACTCACGGCTAAGGAAACGTCTATTTGGGTTGCTGTTATAAATTACGAGGAAAAACTTGCTAGAAGGAAGTATCCTGATTTGTTCGCAACTCTTAATTCTAGTGGTACCGGAAGTAACTGTCTTCTTGTTGAGACAAACGATTATGATGTGGAAGGTGTAGAGCGCAAACGCGCAAAACCAATACCTGCTGTTAACAATTCATCAACCTCCAATGTTTCTGTTGTGCCACCTTATGAAGTTTCTAACAAGAGAAAATTTGAACTTGGTAAGAGAAGTACTACTCATAATTATGAGATTTTTTCTTTGCAAAAAGATAAGAATGCAAGTAACAATCATCACTTTGGAAGAAAGAACAACAATCACTTCCAAATGGCTGGAGTTGGAAGCTCAAAATATAATCAAATTGGCAAAAATGACAAGTCTACTGCTGCAGCTGCAGCTGCACCTCTTGAACAAAATGTGAAAGCTGCTGGTGCAAATCAGATCAATCGTCATAGAGGTAATCATATTTATCAGTATCTTACTATCACGCATGGACACCTCTAG 1338 0.3999 MNPKVGNGAVTYPSKGESSNNPRKEKGKEVDDEEKELTIEDLETRIWRDKMLLRKMKEERRQGDKCKSYEQLKRKTMTRAQDGILRHMLKMMEACDVRGFIYGIVPENGKPMSGSSDNLRGWWKERVKFDRNGPAAIAKYEEESGISKMKEMLNGDSPTPYSLLELPDTTLGSLLSSLMQHCEPPQRRFPLERGIYPPWWPTGRESWWNEMGFSEDPGPPPYRKPHDLKKAWKICVLHAVIKHISPNIQKIKNVVRHSRSLQDKLTAKETSIWVAVINYEEKLARRKYPDLFATLNSSGTGSNCLLVETNDYDVEGVERKRAKPIPAVNNSSTSNVSVVPPYEVSNKRKFELGKRSTTHNYEIFSLQKDKNASNNHHFGRKNNNHFQMAGVGSSKYNQIGKNDKSTAAAAAAPLEQNVKAAGANQINRHRGNHIYQYLTITHGHL 445
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g07843 445 Gene3D - 158 291 IPR023278 GO:0003700|GO:0005634
Vivi3g07843 445 PANTHER ETHYLENE INSENSITIVE 3-LIKE 2 PROTEIN 26 416 IPR006957 GO:0003700|GO:0005634
Vivi3g07843 445 MobiDBLite consensus disorder prediction 19 35 - -
Vivi3g07843 445 FunFam Ethylene insensitive 3-like 1 154 291 - -
Vivi3g07843 445 Pfam Ethylene insensitive 3 40 281 IPR047091 GO:0003700
Vivi3g07843 445 Gene3D - 66 152 IPR023278 GO:0003700|GO:0005634
Vivi3g07843 445 SUPERFAMILY DNA-binding domain of EIN3-like 161 284 IPR023278 GO:0003700|GO:0005634
Vivi3g07843 445 MobiDBLite consensus disorder prediction 1 35 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g07843 Vivi-Chr3 215447493 215449472 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g07843 22 381 EIL Transcription Factor Family AT3G20770 49.728 2.54e-124 373
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF EIL Vivi3g07843 EIN3 1.4e-110 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi3g07843 3 215447493 215449472 Vivi3g07843 3 215447493 215449472 ECH
Vivi3g03836 3 65862151 65865306 Vivi3g07843 3 215447493 215449472 ECH