Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g06328 ATGCAAGAAGCAATTCATCATCCCACAATCAACATGAAGAGAATCCTTAGTAGGAATCACGACGGCGAAGAACTTATACCGGATTCGCACACTCGTTCTCCTTCAATCTCCAACAGAAAATGCTCCGTTGCCACTTCCATCCCCTTATTCGCTTCTCTCGCTCTCATTACTCTCTCCCTCTTCTCTCTCTCCTTCATTCTTCCACACTCTCCATCAACAACATCTACCAGTACTTTTCAACATCAAGGTTTGAACAGTGATGCCTCTGATTCTGTTAAGTTCATAAAAGATAAACTACTGGGTGGACTTCTAGCAGCTGGATTTGATGATGGATCATGTCTCAGCAGGTATCATTCAATTAAAGGACTATCAGGGAATCCCTCCTCTTACCTCATCTCCAGATTAAGAAAGTATGAAGCTCTCCACAAAAAATGCGGACCTTATACTGAATCCTACAACAAAACGGTGAAAGATCTCAGTTCAGGTCATTTAAGCGAGTCCCCGGATTGTAAATATGTTGTTTGGATTTCATTTAGTGGTCTAGGAAACAGGATATTGACCTTGGCTTCTGCATTTCTTTATGCTCTTCTCACAAACCGTGTTCTTTTGGTTGATCCTGGAGTTGATATGGTTGATCTCTTTTGCGAACCGATTCCAGATGTTTCATGGTTTATCCCTCCTGATTTTCCTCTCAACAGTCAATTTCATGCTTTAAATCAGAAATCTGATCAATGTCATGGAAAAATGCTGAAAGATAAATCAGTCACAAATTCGAAAGTTCCTTCTTCTGTCTACCTTCATTTGGTACATGATTACAGTGACGAGGATAAGCTTTTCTTCTGCGATGAAGAACAAAAGTTTCTACAGAAAGTACCTTGGTTGATAATGAAAACGGATAATTACTTTATTCCGTCGCTATTCTTGATGTCGTCTTTTGATCGGGAGCTCAGTGATCTCTTTCCAAACAAGGAGAAAGTTTTTCATTTCTTAGGCAGGTATTTGTTCCACCCTAAAAACAAAGTTTGGGGTTTTGTTACTAGATACTATGAATCTTATTTAGCTAATGTTGATGAAAGAGTCGGCATCCAGATTAGGGTTTTCGACACTAGACCCGGTCCATTTCAATATGTATTGGATCAAATCCTAGCTTGTACAATGAAGGAGAATCTCTTGCCTGATGTTGACAAGAAGCATGATATTACTGGTTCATTAGGAAGATCGAAGTCGAAAGCAATACTAATGACATCCTTAAGCTCTGGCTATTTCGAAAAAATAAGAGACATGTATTGGGAATATCCAACGCTGACTGGAGAAGTTATCAGCGTATACCAACCAAGCCATGAGGGATATCAGCAAACTGAGAAGCAAATACACAACCAAAAAGCTTGGGCGGAAATGTATTTATTGAGTTTAACCGATGTGTTGGTGACTAGCTCCTGGTCTACTTTCGGCTACGTGGCGCAGGGGCTTGGAGGTTTGAAACCTTGGATACTATACAAACCTGAGAATGAAACAGCTCCTGATCCTCCTTGTCGACGTGCAATATCGATGGAGCCGTGTTTTCATGCTCCTCCTTTCTATGATTGTAAGGCTAAGAGAGGAACTGATACAGGTGCAGTTGTTCCACATGTAAGACATTGTGAGGATATGAGTTGGGGTCTTAAAATTGTAGACAATTAA 1680 0.4036 MQEAIHHPTINMKRILSRNHDGEELIPDSHTRSPSISNRKCSVATSIPLFASLALITLSLFSLSFILPHSPSTTSTSTFQHQGLNSDASDSVKFIKDKLLGGLLAAGFDDGSCLSRYHSIKGLSGNPSSYLISRLRKYEALHKKCGPYTESYNKTVKDLSSGHLSESPDCKYVVWISFSGLGNRILTLASAFLYALLTNRVLLVDPGVDMVDLFCEPIPDVSWFIPPDFPLNSQFHALNQKSDQCHGKMLKDKSVTNSKVPSSVYLHLVHDYSDEDKLFFCDEEQKFLQKVPWLIMKTDNYFIPSLFLMSSFDRELSDLFPNKEKVFHFLGRYLFHPKNKVWGFVTRYYESYLANVDERVGIQIRVFDTRPGPFQYVLDQILACTMKENLLPDVDKKHDITGSLGRSKSKAILMTSLSSGYFEKIRDMYWEYPTLTGEVISVYQPSHEGYQQTEKQIHNQKAWAEMYLLSLTDVLVTSSWSTFGYVAQGLGGLKPWILYKPENETAPDPPCRRAISMEPCFHAPPFYDCKAKRGTDTGAVVPHVRHCEDMSWGLKIVDN 559
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g06328 559 FunFam Galactoside 2-alpha-L-fucosyltransferase 168 219 - -
Vivi3g06328 559 Pfam Xyloglucan fucosyltransferase 94 530 IPR004938 GO:0008107|GO:0016020|GO:0042546
Vivi3g06328 559 Gene3D - 168 211 - -
Vivi3g06328 559 PANTHER FUCOSYLTRANSFERASE 2-RELATED 60 558 IPR004938 GO:0008107|GO:0016020|GO:0042546
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g06328 Vivi-Chr3 169402573 169406626 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g06328 50 557 Xyloglucan Fucosyltransferase1 AT2G03220 61.868 0.0 669
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g06328 K13681 - gmx:100800258 827.394