Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g04974 ATGACAACTAGGCACTTTGTTCAACTCTGCATCTATTTGTTAGCTGGATATTCATTTATATGGTCACCTGGAAACTGTTCGGTTGGTGATTCAGTATCAGGTCAGGTGACTGGCTCCCCAAATCCTATGTCTAATAGTAGAAATGCTAAATCTTTTTCTCCCGTGAAGCAATTTCTGATGCAGTCTTATTATGACAGATATACGGGCTTACATGATTCAGACTTTGAAAATTTCATGTCTCATGAAGTCACTTCTGGTCTGTGTGAAGTGCTTCCAGAAAACCATAGTTCCATATTAAGATTGTCCATTCTAAAACGCAATCTTGTTGTTGAAGGTTCTCACCGTCGCATGTCTACATTAATCAAATTACAAACCCAACAGCTGAACTCTTTGTCTGATCTTTTAAGCGACTCATGTGAATTAATAATTATTGAAAGGCTGCCTTCTGGAGTTTTTGCTAATCCATTTGAATTACAGCATCTTGCTCAACGTGGCGTGTTCAGTGATATAACTGTCTTTGGTGATACAAATCTGGAGCTGCCTTCCTTCTTGTCCAATCGATCTGCCGTTGAAATCCACTTAGATATTGATCCAAATACATTGCTACAGCCAGCTAATATCAGCATAGAGTTTCCTTTGCACGCACGATATCAACCTCTGAATGAAAGTGGCTACTCAATAGTCGAATTTGGTGAACCGGATACGATACTGCGCTGCAGCACAAAGGTGTTTTGCATTTGGATATTCTCTGTTCCAACATATCATAACAAGGACATCATGGACCTGAAGTTGTCTTCTGATGGTGCATACTCATGCGTCGACGGGATTCACAAATCTGTTTCCACAAACTACAAAATCTGTCCCTCTGATACTCTCTCCACCATTGTTGGCTCTGTTTACGGTGTATGGTGTATATAA 918 0.4009 MTTRHFVQLCIYLLAGYSFIWSPGNCSVGDSVSGQVTGSPNPMSNSRNAKSFSPVKQFLMQSYYDRYTGLHDSDFENFMSHEVTSGLCEVLPENHSSILRLSILKRNLVVEGSHRRMSTLIKLQTQQLNSLSDLLSDSCELIIIERLPSGVFANPFELQHLAQRGVFSDITVFGDTNLELPSFLSNRSAVEIHLDIDPNTLLQPANISIEFPLHARYQPLNESGYSIVEFGEPDTILRCSTKVFCIWIFSVPTYHNKDIMDLKLSSDGAYSCVDGIHKSVSTNYKICPSDTLSTIVGSVYGVWCI 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g04974 305 PANTHER PHOSPHATIDYLINOSITOL-GLYCAN BIOSYNTHESIS CLASS X PROTEIN 46 241 IPR040039 GO:0006506
Vivi3g04974 305 Pfam PIG-X / PBN1 112 240 IPR013233 GO:0005789|GO:0006506
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g04974 Vivi-Chr3 95921100 95923682 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g04974 271 301 LysM Receptor-like Protein (LYPs) Gene Family AT1G21880 70.968 6.71e-06 45.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g04974 K07541 - gmx:100792914 276.174