Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g02791 ATGGCGTTATCAACTCCTCCACAAATTCAAAGATTCCTCTTAACCAAACTCCATAAACGCTCCTCCACCACCTCTTCCAAATCCAACAACCATCACAAAAATAGAACCATAAACATCTTCAGTGCCATTACCAACAACCGAAGAAGCCGGTGCTACTCCGCCATAGCCATTGATGCACCTTCCTCTTTGACGGACTCTCCTCCTATTAGATGGGGATCCGTTTCCTTGCAAGGTCCCCGCGAAGAAATGGAAGATGATATTGTTCTTCGACCGGGTAGTCTCCAAGGTTTTTCTTTCGCTGCTGTGTTTGATGGCCATGGAGGGTTTGCTTCTGTCCAGTTTCTCAGGGATGAACTATACAAGGAGTGTTATGAAGCTCTACAAGGTGGGTTACTATTGCTTGGGAAAGATTTCAAAGCTGTTGAAGAAGCAATAAAACAGGCATTTGCAAAGGCGGATACAAGTTTGTTAAAATGGCTTGAAATGAAAGGGGAGGAGGAGGATGAATCAGGTGCTACAGCAACTGCCATATTTCTTGGGGATAATAAGCTGCTAATTTCACATATTGGCGACTCATCTGTGGTTTTATGCAGATCTGGAAAACCAGAATTGCTGACTAGTCCTCACCGTCCCTATGGGAGCAACAAGGCTTCTCTTCAAGAAATCAAAAGAATCAGAGAAGCAGGTGGATGGATTGTCAATGGAAGGATTTGTGGAGATATTGCTGTATCTCGTGCTTTTGGGGACATTCGATTCAAAACGAAGAAGAATGAGATGCTAAGAAAAGGAGTTCGGGAAGGAAGATGGACAGAAAAGTTCATTTCTCGTGTACAATTCAACGACGACTTGGTTGTTGCACGCCCTGATATTTATCAAGTAGCTCTTGGCTCAGATGCAGAATTTATAGTCTTAGCATCCGATGGCTTATGGGATTACATGAGCAGCTCTGATGCAGTTTCTTTTGTGAGGGAGCAACTACGAAAACATGGAAACACACAGCTAGCTTGTGAATCCCTTGCACAAGTTGTTTTGGACCAACGTACACAGGATAATGTCAGCATTATAATTGCCGATCTAGGGAAGACAGATTGGAAGAATGTGCCACTGCAGAAACAGAATGTCATAGTTGAGCTTGTCCAAGCCGTCGCCACGGTTGGAATTGTGTCTATTGGAATCTGGTTTTCATCACAGCTTTCTTTATAG 1203 0.4356 MALSTPPQIQRFLLTKLHKRSSTTSSKSNNHHKNRTINIFSAITNNRRSRCYSAIAIDAPSSLTDSPPIRWGSVSLQGPREEMEDDIVLRPGSLQGFSFAAVFDGHGGFASVQFLRDELYKECYEALQGGLLLLGKDFKAVEEAIKQAFAKADTSLLKWLEMKGEEEDESGATATAIFLGDNKLLISHIGDSSVVLCRSGKPELLTSPHRPYGSNKASLQEIKRIREAGGWIVNGRICGDIAVSRAFGDIRFKTKKNEMLRKGVREGRWTEKFISRVQFNDDLVVARPDIYQVALGSDAEFIVLASDGLWDYMSSSDAVSFVREQLRKHGNTQLACESLAQVVLDQRTQDNVSIIIADLGKTDWKNVPLQKQNVIVELVQAVATVGIVSIGIWFSSQLSL 400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g02791 400 CDD PP2Cc 69 359 IPR001932 -
Vivi3g02791 400 SUPERFAMILY PP2C-like 64 360 IPR036457 -
Vivi3g02791 400 Gene3D - 69 366 IPR036457 -
Vivi3g02791 400 ProSiteProfiles PPM-type phosphatase domain profile. 70 359 IPR001932 -
Vivi3g02791 400 Pfam Protein phosphatase 2C 72 352 IPR001932 -
Vivi3g02791 400 ProSitePatterns PPM-type phosphatase domain signature. 99 107 IPR000222 GO:0043169
Vivi3g02791 400 SMART PP2C_4 60 357 IPR001932 -
Vivi3g02791 400 FunFam Protein phosphatase 2C 57 69 366 - -
Vivi3g02791 400 PANTHER PROTEIN PHOSPHATASE 2C 31 357 IPR015655 GO:0004722|GO:0006470
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g02791 Vivi-Chr3 46776128 46779877 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g02791 48 336 PP2C-type Phosphatase Gene Family AT4G27800 67.820 2.21e-145 414
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi3g02791 3 46776128 46779877 Vivi3g02791 3 46776128 46779877 ECH
Vivi3g02791 3 46776128 46779877 Vivi4g05700 4 193377649 193379715 PCT