Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g01950 ATGGATCCTCAAATCTCCATCGACGTTCCTCCTTACCTCCGTGTCCACAAAAACGGAACCGTCGAGAGACTAGTAGGCATTGACGTTGCTCCTCCCGGCATCGATCCTCAAACAAACGTCATCTCCAAAGACATCACAATCCTCCCAAAAACCGGTGTCACAGCAAGACTCTACTCACCCACCAAAACTTCAACAAAACTTTCTTTACTCATCTACCTCCATGGTGGTGCCTATTGCATATCTTCACCTTCTGACCCTCTTTACCATAACTCCCTCAACAACCTTGTAGCCGAAGCAAACGTCATCGCTATCTCTGTTAATTACCGGCTAGCACCAGAACATCCACTTCCAACCGCGTACGATGATTCTTGGGAAGCACTTCAATGGGTTGCTTCACACGCCGTCGAAGACGGCTTCGACGGGCAAGAGAAAGAAAACTGGATCAAAGACAAAGTTGACTTTAACAGAGTTTTCTTAGCAGGTGACAGTGCTGGTGCTAACATGGGACACTACATGTGTTTAAAGGAACACAATTTTATAAATTTCAAGATTCTGGGTCTTGTTATGGTGAATCCTTATTTCTGGGGGAAGGAACCAATTGGTATAGAGATAAGTGATTATGAGAGGAAGAAAATGGTTGATAAATGGTGGGAATTTGTTTGTCCTTCTTATAAAGGAAGTGATGATCCTTTGATTAATCCGTTTGTGGAAGAAGCTCCTGATATTGAAGGATTGTGTGTTGAAAAAGTGCTTGTTACTGTTGCTGAGAAAGATATATTGAAAGAAAGAGGGAAACTTTATCATAAGAAATTGGTTAACAGTAGTTGGAAAGGAAGTGCTGAGTTTTATGAAACTGAAGAGGAGGATCATGTGTTTCATATTTTCAACCCAGGTTGTGATAAAGCTAAAAGTTTGGTTAAACGCATAGCTGTTTTCATCAATGAATAG 948 0.4146 MDPQISIDVPPYLRVHKNGTVERLVGIDVAPPGIDPQTNVISKDITILPKTGVTARLYSPTKTSTKLSLLIYLHGGAYCISSPSDPLYHNSLNNLVAEANVIAISVNYRLAPEHPLPTAYDDSWEALQWVASHAVEDGFDGQEKENWIKDKVDFNRVFLAGDSAGANMGHYMCLKEHNFINFKILGLVMVNPYFWGKEPIGIEISDYERKKMVDKWWEFVCPSYKGSDDPLINPFVEEAPDIEGLCVEKVLVTVAEKDILKERGKLYHKKLVNSSWKGSAEFYETEEEDHVFHIFNPGCDKAKSLVKRIAVFINE 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g01950 315 Pfam alpha/beta hydrolase fold 70 293 IPR013094 GO:0016787
Vivi3g01950 315 SUPERFAMILY alpha/beta-Hydrolases 8 315 IPR029058 -
Vivi3g01950 315 Gene3D alpha/beta hydrolase 14 315 IPR029058 -
Vivi3g01950 315 PANTHER ARYLACETAMIDE DEACETYLASE 9 300 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g01950 Vivi-Chr3 32238971 32240288 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g01950 1 313 Carbohydrate Esterase AT3G48700 42.424 4.44e-87 262
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi3g01950 3 32238971 32240288 Vivi3g01950 3 32238971 32240288 ECH
Vivi3g01950 3 32238971 32240288 Vivi3g01950 3 32238971 32240288 PCT