Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g01934 ATGCAAGCGGTGGGGAGGTTAGGGAGCTACATTAGTCAAGGCGTATACACCGTTTCCGGCCCCTTTCATCCATTCGGTGGCGCCGTCGATATCGTCGTCGTTCAACAACAAGACGGTTCCTTCAAATCCTCGCCATGGTACGTTCGATTCGGCAAATTCCAAGGAGTTTTGAAATCGAAAGAGAAAATCGTCCAGATCAACGTGAACGGAATCGACGCTGATTTACAAATGCATCTCGATAACAAAGGGGAAGCGTTCTTTCTGAGAGAGATTGATGTTGAATCGGTTTTGTTTGATTCGATTGAATCTGGTGATGGTGATGATCTCGATGTTCAATCGTTGAAGAGTAAGAGTAGTAATTTTGGTTCGGAGGATGGGAAGGTTGTTGGGAGGACTAATTCGAATTCGCGGCGGTCGAGGATACTTGGGCTTATGTTCGGGAGAAGGTCTTTGAGTGGGGAATTTGAAGATGCTATTGGGAATAAGGAACGTGCTGAGATTGCGGCGAATTTGTTGGATATTAAGTGGTCGACGAATCTCGATGGGGAGGATAATCGAGAGAGTGGTGATCATGCTGTGGTTGTGGAGAATGAGGATGGTTCTTTTGGTGTTGCCAAGGTTGAGAAGAAGTTGAGTGGAGAAAAGGTTTCAAGGGAACAAACTCATGAGGTCATGTACCTTGCTCATGGGGAAAGTGCAGAGGTCCATCTACATGATCAGGTCTTGCATTCACTCGTAACTAAGGGTATGGAGAAGGAGGAAGTCACTAAGAATGCTGATGTAGTGGAAGTCTATGAATTTCATTCTCAGGCTCAGCGAATAGATTCTTCTGATTCAGAAGCTAGTATGTACGACGATGTGGAGGATGTTGAAGACCCAACAACATCTCCAAAACCTCAAATCAACAATTTGGATGCAGGACATTGTTCAAGCGAGAAAGTTGAGTCCTATTGTGTAGACTTGACAAAACCTCCAAAACCTCCAAAACCTCAAACAAACAACTTGGGTATAGGGCATTGTTCAAGTGAAAAAGCTGAGTCCTGTTCTGTTACCAATGCTTCCAGTTACAACAGCCAGGATGACCGAGGATTATGTGAGAATAACATGAAGGATAAAGATGTCTCTAGCTCGCTATCAACTCCATCACACTCTTTTGGTGATTGTTTACCTAGTGAAACATCTAGGATATCACTGTCCCCGAGTTCAGATGAAGAGAATTTCCTTTTTGGTGACTTTGATGAAAGTGGAGTTAATGATCAATTTGAGGGATCATTAAGTCCCAAATGTATAGATAAAAAAGATAATATTTCTTATGAGAATGGAACTGAAAACTCAAGAGTGACTTCCTGTCCCATAGTTATCCCTAAAAATGAGGATGCTGGGGAGGAAGTTGGGCGGCGTACTGGATCCTTGCCAAATATTTCTTCTGGTAGTAACAGTATGTGCCAACATGTTCGTTATCCTTTAAGTCAATCACTGGACTCGACATTTCCTGGCAAGGATAACTTGGAATCCTTAAAATTAGACGAGTACAAAGAGAAGCAGTTACCTCATGAACAGGCGGATGCCAAAGATTGCCAAGATTCTGATGAATTCAAAGATACTGCTCTGAATCTTCCCCCTGGAGGTACATCAACAGGAAATTGGAGAATTTGGCCTTTCTCCTTGAGCAGATCAGTATCTAGAGAATCTTCGCCGCCAAAACCAAATGATGCTAAAAGTACTATTAATGGCAATTCTTCAGAGAATAAGACTTTAACAGATGTGAACAAAAATGATAGCAAACCCAATCTAACGAAAAAGATGATTAGGGAAACAACTCCAACTTCTGAACAGATAGCATCATTGAATCTGAAGGAAGGGAGGAACATTGTAACCTTCACTTTTTCTACAGCTATGCTGGGGAAACAGCAGGTTGATGCTCAAATATATCTGTGGAAATGGAACGACCGCATAGTTATCTCGGATGTGGATGGGACAATTACGAAGTCAGATGTTCTTGGTCAATTCATGCCTTTGGTTGGTGTTGACTGGTCACAGACTGGTGTTGCACATTTATTCTCCGCTGTTAAGGAAAATGGTTACCAACTGCTTTTTCTCAGTGCTCGTTCAATTTCTCAAGCCTATATTACACGACAATTCCTACTGAATCTTAAACAGGATGGCAAAATTTTACCAGAAGGTCCTGTTGTTATTTCCCCCGATGGACTTTTTCCATCTCTATACCGTGAAGTTATTAGGAGGGTTCCCCATGAATTCAAAATTGCATGCTTAGAGAGTATCAAGGCTCTTTTTCCGTCTGATTGCAATCCGTTCTATGCTGGTTTTGGAAATAGGGATACTGACGAAATCAGTTACCTTAAGGTTGGAATCCCTTTAGGAAAAATCTTCATTATAAACCCCAAGGGGGAGATAGTTGTGAACCGAAGTATTGACACAAAATCATATACTTCTATGCATGCTCTCGTGAACGGAATGTTCCCCCCAACGAGCTCGTCTGAGCAGGAGGATTTTAATTCATGGAATTTCTGGAAGCTACCACCTTCTGCAATTGATATTTGA 2562 0.4208 MQAVGRLGSYISQGVYTVSGPFHPFGGAVDIVVVQQQDGSFKSSPWYVRFGKFQGVLKSKEKIVQINVNGIDADLQMHLDNKGEAFFLREIDVESVLFDSIESGDGDDLDVQSLKSKSSNFGSEDGKVVGRTNSNSRRSRILGLMFGRRSLSGEFEDAIGNKERAEIAANLLDIKWSTNLDGEDNRESGDHAVVVENEDGSFGVAKVEKKLSGEKVSREQTHEVMYLAHGESAEVHLHDQVLHSLVTKGMEKEEVTKNADVVEVYEFHSQAQRIDSSDSEASMYDDVEDVEDPTTSPKPQINNLDAGHCSSEKVESYCVDLTKPPKPPKPQTNNLGIGHCSSEKAESCSVTNASSYNSQDDRGLCENNMKDKDVSSSLSTPSHSFGDCLPSETSRISLSPSSDEENFLFGDFDESGVNDQFEGSLSPKCIDKKDNISYENGTENSRVTSCPIVIPKNEDAGEEVGRRTGSLPNISSGSNSMCQHVRYPLSQSLDSTFPGKDNLESLKLDEYKEKQLPHEQADAKDCQDSDEFKDTALNLPPGGTSTGNWRIWPFSLSRSVSRESSPPKPNDAKSTINGNSSENKTLTDVNKNDSKPNLTKKMIRETTPTSEQIASLNLKEGRNIVTFTFSTAMLGKQQVDAQIYLWKWNDRIVISDVDGTITKSDVLGQFMPLVGVDWSQTGVAHLFSAVKENGYQLLFLSARSISQAYITRQFLLNLKQDGKILPEGPVVISPDGLFPSLYREVIRRVPHEFKIACLESIKALFPSDCNPFYAGFGNRDTDEISYLKVGIPLGKIFIINPKGEIVVNRSIDTKSYTSMHALVNGMFPPTSSSEQEDFNSWNFWKLPPSAIDI 853
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g01934 853 Pfam LNS2 (Lipin/Ned1/Smp2) 606 828 IPR013209 -
Vivi3g01934 853 MobiDBLite consensus disorder prediction 558 593 - -
Vivi3g01934 853 SMART lns2 652 808 IPR031315 -
Vivi3g01934 853 MobiDBLite consensus disorder prediction 516 532 - -
Vivi3g01934 853 MobiDBLite consensus disorder prediction 558 600 - -
Vivi3g01934 853 MobiDBLite consensus disorder prediction 352 386 - -
Vivi3g01934 853 Pfam lipin, N-terminal conserved region 1 94 IPR007651 -
Vivi3g01934 853 PANTHER LIPIN 1 852 IPR026058 -
Vivi3g01934 853 MobiDBLite consensus disorder prediction 516 544 - -
Vivi3g01934 853 MobiDBLite consensus disorder prediction 370 386 - -
Vivi3g01934 853 MobiDBLite consensus disorder prediction 271 306 - -
Vivi3g01934 853 SUPERFAMILY HAD-like 644 796 IPR036412 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g01934 Vivi-Chr3 31972086 31981287 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi3g01934 3 31972086 31981287 Vivi3g01934 3 31972086 31981287 ECH
Vivi4g05628 4 192215854 192220642 Vivi3g01934 3 31972086 31981287 PCT