Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g01927 ATGGAGGATGTTCAAGACAAGTTACCCTCTGACTCCTCTACAAAAATTGCTGAAGAGACATCACTGGCAAAACATGTTGATGACATGTTGCCCTCTGAATCTTCTTCAAAAGTGACTGAAGAGACACAAATGGAAGAACACGTTGCAAACAAGTTACCCTCTGATTCCTCTACAAAATTTGCTGAAGAGTCACCACTAGCAGAACATGTTGAAGGTATGTTGCCCTCTCAATCTTCTTCAAAAATTACTGAAGAGACACATGCGGAAGAACACGTTGAAGACAAGCTACCCTCTGACTCCTCTACAAAAATTGCTGAAGAGACACTACTGGCAAAACATGTTGAAGACATGTTGCCTTCTGAATTTTCTTCAAAAAATGCTGAAGAGGTACATATGGAAGAACGCGTTGATGACAAGCTACCCTCTGAATCCCCTTCAAAAATTTCTGAAGAGAAACCAGTGGCAGAACATGTTGAAGACAATCTACTCTTTAATGGCTCTACAAATATTACTGAGACACCACTTACAGAGCCCTCTGAAGAAAATACTGTAGTGATAAACCCACCATATAATCAATCTTCCACAGAAATTCCAATTAGTAATGGAGAAGTGAATTCTGGCTCTCACTTAACAGTGAATGAGTTCCCTGAGTTATCAGTGTTGCCAGATGCTTCTGATGGTCACACTATAATACCAGATGAGGATGTTTCTGTAGCGAATTCAGCTTCAATTCCAAATGATAAGGTGGATCTAACAGAGAGAAGCGGTCAGGTAACATTGGTTGAAGATTCTGACCCAGGTGCTACAGAAGATATCTCTGGTAGGCGTGAATTGCATGTTGATGTTACTAATGCTGCTGCTGATAATGAGATTAGACTTTCTGCTTCTTCTTCTGAAACAAATGATTTTTCAACTGATCACAATCAAGTAAAGATGCCTGTTGGAGCAGTTGACTCACCCACTCAAACCAAGATGGTTAATGTAAAAAGAGGCCTGATTGATACTACGCCTCCATTTGAATCTGTCAAGGAAGCTGTTTCTAAGTTTGGAGGAATTGTGGATTGGAAGGCTCATAGAATCCAGACTGTGGAGAGGCGCACTCTAGTTGAACAGGAACTTGATAAAGCAAATGAGGAGATCCCACAATACAAAAAACAAGCAGAGGCGGCTGAAGAGACAAAAGTTCAAGTATTAAAGGAGCTGGACAGCACGAAGAGACTTATAGAAGAGTTAAAGCTTAACCTAGAGAGGGCACAAACCGAGGAGCATCAGGCAAGACAGGACTCGGAACTTGCAAAGCTTAGAGTGGAAGAGATGGAGCAAGGTATTGCAGACGAATCTAGTGTTGCAGCCAAGGCACAACTTGAGGTTGCTAAAGCTAGGTATTCAGCAGCCATTTCAGATTTAGCAGCTGTGAAAGAGGAGCTAGAAGCATTGCGTAAGGAATATGCTTCCTTAGTGACTGATAGAGATGAAGCTATTAAGAAAGCCGAGGAGGCAGTTACGGCATCCAAGGAAGTAGAGAAGTCAGTGGAAGATTTAACTATTGAATTAATTGCCACAAAAGAGTCACTGGAGACTGCTCATGCCGCACACTTGGAAGCAGAGGAACATAGAATAGGAACAGTCATGGCAAGAGATCAAGATTCTCTCTATTGGGAAAAGGAACTTAAACAGGCAGAAGAGGAGCTCCAGAGAATCAATGGGCAAATGTTGTCTGCAAAGGATCTCAAATCGAAACTGGAAACAGCCTCTGGTTTGCTGCTTGATTTGAAAGCTAAATTAACTGCTTATATGGAATCAAAGTTAAAGCAAGAAAGTGATGAAGAGCTTTCACAAGGAGGCCAAGAAGAACCAGGAAAGAAGACACACACGGAAATACAAGCAGCTGTGGAATCAGCCAGAAAGGAACTTGAGGAGGTAAAACTTAACATAGAGAAAGCAAATACGGAGGTTATTTGCTTGAAGCTAGCTGCTACATCTTTAAAATCAGAACTGGAACAAGAAAAATCAACTCTTGCCTCCATCAAGCAAAGAGAAGGAATGGCCTCCATTGCAGTTGCATCTCTAGAAGCTGAGTTGGATAAGACTAGATCAGAAATAGCTTTGGTACAAATGAAGGAGAAAGAATCCAAAGAGCAAATGGCCGAACTTCCAAAGAAGCTACAACTAACAGCTGAAGAGGCTAATCAGGCCAACTTGCTTGCTCAAGCTGCTCGTGAAGAACTGCAGAAAGTAAATGCAGAAGCAGAACAAGCCAAGGCTGGAGTAAGTACCTTGGAAAGCAGGTTACTTGCTGCTCAAAAGGAGATAGATGCTGCAAAGGCTTCTGAAAAGTTGGCAATAGCAGCAATTAAAGCATTGCAAGAGAGTGAGTCAAATAGAAGCAAAAATGAAGTGGACCCTTCCAGTGGGGTAACACTTTCTTTGGATGAGTACTATGAGCTTAGCAAACGAGCTCACGAGGCAGAAGAGCGAGCCAATATGAGGGTTGCAGCTGCTAATTCTGATGTTGAGAAAGCGAAGGACTCTGAATTGAAATCCTTCGAGAAGTTGGATGAAGTGAATAGAGAGATAGCTGCTAGAAGGGAATCCTTGAAGATGGCAATGGAAAAAGCTGAAAAAGCAAAGGAAGGTAAATTAGGTGTAGAACAAGAACTTAGAAAGTGGAGGGCTGAAAATGAGCAACGGAGAAAGGCTGGCGAGTCTGGCCAAGGAATGGTTGACCAAAACAAAAGCCCTAGAGCTAGTTTTGAGGGGAGTAAGGAAGCAAATAATTTTGACCGGTCCCGAATCACATCAAGTCCGAAGGCTGATATACACGCAGAAAATGATGAAGGTGGATCATCACCAGAATCAAAACATGGAAAAAAGAAGAAATCTATGTTCCCACGAGTTTTGATGTTCTTTGCTAGAAGAAAAAAACATTCAAACAAGTCCGGGTAA 2946 0.4192 MEDVQDKLPSDSSTKIAEETSLAKHVDDMLPSESSSKVTEETQMEEHVANKLPSDSSTKFAEESPLAEHVEGMLPSQSSSKITEETHAEEHVEDKLPSDSSTKIAEETLLAKHVEDMLPSEFSSKNAEEVHMEERVDDKLPSESPSKISEEKPVAEHVEDNLLFNGSTNITETPLTEPSEENTVVINPPYNQSSTEIPISNGEVNSGSHLTVNEFPELSVLPDASDGHTIIPDEDVSVANSASIPNDKVDLTERSGQVTLVEDSDPGATEDISGRRELHVDVTNAAADNEIRLSASSSETNDFSTDHNQVKMPVGAVDSPTQTKMVNVKRGLIDTTPPFESVKEAVSKFGGIVDWKAHRIQTVERRTLVEQELDKANEEIPQYKKQAEAAEETKVQVLKELDSTKRLIEELKLNLERAQTEEHQARQDSELAKLRVEEMEQGIADESSVAAKAQLEVAKARYSAAISDLAAVKEELEALRKEYASLVTDRDEAIKKAEEAVTASKEVEKSVEDLTIELIATKESLETAHAAHLEAEEHRIGTVMARDQDSLYWEKELKQAEEELQRINGQMLSAKDLKSKLETASGLLLDLKAKLTAYMESKLKQESDEELSQGGQEEPGKKTHTEIQAAVESARKELEEVKLNIEKANTEVICLKLAATSLKSELEQEKSTLASIKQREGMASIAVASLEAELDKTRSEIALVQMKEKESKEQMAELPKKLQLTAEEANQANLLAQAAREELQKVNAEAEQAKAGVSTLESRLLAAQKEIDAAKASEKLAIAAIKALQESESNRSKNEVDPSSGVTLSLDEYYELSKRAHEAEERANMRVAAANSDVEKAKDSELKSFEKLDEVNREIAARRESLKMAMEKAEKAKEGKLGVEQELRKWRAENEQRRKAGESGQGMVDQNKSPRASFEGSKEANNFDRSRITSSPKADIHAENDEGGSSPESKHGKKKKSMFPRVLMFFARRKKHSNKSG 981
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g01927 981 MobiDBLite consensus disorder prediction 906 920 - -
Vivi3g01927 981 Pfam Weak chloroplast movement under blue light 330 897 IPR008545 -
Vivi3g01927 981 Coils Coil 722 777 - -
Vivi3g01927 981 Coils Coil 366 428 - -
Vivi3g01927 981 MobiDBLite consensus disorder prediction 162 191 - -
Vivi3g01927 981 PANTHER HEAVY CHAIN, PUTATIVE, EXPRESSED-RELATED-RELATED 331 971 - -
Vivi3g01927 981 MobiDBLite consensus disorder prediction 1 26 - -
Vivi3g01927 981 MobiDBLite consensus disorder prediction 870 981 - -
Vivi3g01927 981 MobiDBLite consensus disorder prediction 1 102 - -
Vivi3g01927 981 Coils Coil 455 496 - -
Vivi3g01927 981 MobiDBLite consensus disorder prediction 870 902 - -
Vivi3g01927 981 MobiDBLite consensus disorder prediction 83 102 - -
Vivi3g01927 981 MobiDBLite consensus disorder prediction 122 191 - -
Vivi3g01927 981 MobiDBLite consensus disorder prediction 604 624 - -
Vivi3g01927 981 MobiDBLite consensus disorder prediction 126 158 - -
Vivi3g01927 981 Coils Coil 624 679 - -
Vivi3g01927 981 Coils Coil 687 707 - -
Vivi3g01927 981 Coils Coil 852 893 - -
Vivi3g01927 981 Coils Coil 550 594 - -
Vivi3g01927 981 MobiDBLite consensus disorder prediction 934 957 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g01927 Vivi-Chr3 31623164 31628716 Dispersed/Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi3g01927 3 31623164 31628716 Vivi3g01927 3 31623164 31628716 ECH
Vivi4g05619 4 192024398 192028869 Vivi3g01927 3 31623164 31628716 PCT