Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g01885 ATGTGGATACATATTGCAGTCATAGCCTCCACCGTTGGATGCGTATCAACCATACTCTTGATCTTAATCTGTCGCCGTTGGTGTTACACAAGAAACCGTAGAGATTCTTCTTCTGAACAAGCTAATATAACCAGAATTGAAAGTTCTAGAACTAGAATTCATCATCATCATCGCATGCCAAGTGTTCATCATCAAATAGATCAAGGTAACAAAAACAAAAGTAGCAATAATAATCATTCACTGTTTCGTTCTGGAAAACGAACAGCAACAGGTTTATTCAGTTGGATTAACAATCCATCTATGGCCGTTGATGCGGTTGAAAATGGATGGTCGAGATTCGCTTTCACTAGCTATAAAAGTTACATGCCTTCTCCATCTAAAAGGTCTACACTGTTAGGTTCACGTGGGGCTCCTGTGGGTGATTATAAATCCTCAGAAGCTGAGATTAGTTGGGAAGTTTCAAATGATTCGGATGAGTTTATGCAGAAAGTTAGGTTAAATTCCGGAATGAAAAAATTGAATCAAATTATTCAAAATCAGAATAGTTATTCTATTTCTGTTGTGAATTCTGTTATTAGAACTGCTTTGCCGTTACCTGGTCCTGTTTTGGGGAGTTGTGTTTTTCCGCAAGAATCTTATTTTGAGATTACGATTTTGAATTCGTCTATTGGCGATGAGATTGAATCGGTTAGGAAGAGTGTGGAAGGTGATAAGGCTATGCTTATTGCGAAAGGGAATTCGGAGGCGTTGGTTCATGTTACGAGTGGTGGTAAGAATAGTAAAGTGAGTAGTGTTGAAGAAATGAAGGTTGATGGAAGAGATGGTGGTGGGAAGAAGAGTGAATCGGTGATGTTTTCGTTGGGGTTGACGATTGGTGGTCCTGTTGTTTTGAAAGTTCCTGGGAGTTATCCTGGAAGCATTGGTTTCAACTCAAATGGTTCTGTTTATCTTGATGGAATGAAACTTGTATTCGAATCTGAGAAAGCGGAGTGGATAGGAACCAATAAGGTGATCGGTTGTGGATTTGATCCAAGGCAGAAGAAAGTTTTCTTCACATTAGACTCAGAATTGATGCATGTAATCCACTGCCAGACAGAAGAATTCAGCACTCCATTGTATCCAACATTGGCCGCAAATATAGACATCACAGTATTGGTTAATTTTGGACAAAATACATTTAAATATGCACCTGCAAATGCTCAAAGAACACCGAATCCATGTTTAATATCACCGCTTGTAAATTCTCCTGCTGCTACCATAGGCTACGATGACAGCAGGGAACTATTTTCCATGGGTAGGATTGATTCTCAGTGGCTTAATAGGACTACAAACAAAGGAAGCCATAACAATAACAATGTGAACAATAATTCAGCCATGGATTTTGATCAAGAGTCTGAGGCTGATTTGTTTGAAATTGTCTTAGATGGTTCTGGAAAATCTTCAAATACAACATTATAG 1458 0.3868 MWIHIAVIASTVGCVSTILLILICRRWCYTRNRRDSSSEQANITRIESSRTRIHHHHRMPSVHHQIDQGNKNKSSNNNHSLFRSGKRTATGLFSWINNPSMAVDAVENGWSRFAFTSYKSYMPSPSKRSTLLGSRGAPVGDYKSSEAEISWEVSNDSDEFMQKVRLNSGMKKLNQIIQNQNSYSISVVNSVIRTALPLPGPVLGSCVFPQESYFEITILNSSIGDEIESVRKSVEGDKAMLIAKGNSEALVHVTSGGKNSKVSSVEEMKVDGRDGGGKKSESVMFSLGLTIGGPVVLKVPGSYPGSIGFNSNGSVYLDGMKLVFESEKAEWIGTNKVIGCGFDPRQKKVFFTLDSELMHVIHCQTEEFSTPLYPTLAANIDITVLVNFGQNTFKYAPANAQRTPNPCLISPLVNSPAATIGYDDSRELFSMGRIDSQWLNRTTNKGSHNNNNVNNNSAMDFDQESEADLFEIVLDGSGKSSNTTL 485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g01885 485 MobiDBLite consensus disorder prediction 39 81 - -
Vivi3g01885 485 MobiDBLite consensus disorder prediction 65 81 - -
Vivi3g01885 485 Pfam SPRY domain 295 390 IPR003877 GO:0005515
Vivi3g01885 485 PANTHER IMMUNOGLOBULIN SUPERFAMILY MEMBER 5 92 474 IPR043364 GO:0098609
Vivi3g01885 485 SUPERFAMILY Concanavalin A-like lectins/glucanases 299 395 IPR013320 -
Vivi3g01885 485 Gene3D - 156 403 IPR043136 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g01885 Vivi-Chr3 30744104 30746714 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi3g01885 3 30744104 30746714 Vivi3g01885 3 30744104 30746714 ECH
Vivi4g05588 4 191416710 191419146 Vivi3g01885 3 30744104 30746714 PCT