Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g01841 ATGATTGAAACACGCTCTGCAAAGAGAAAATCCAACCACCAGAATCAACCCAACAAGAAGAAACGTATCGTGTTAGGGGAACTTCCCAATTCAACCAATCTCATTGCTCCTCAAAAAAGCCTTAAAAATCTCAACCCCAGAAAACCAACACCGGGGAAGAAGAACAAGATCCCTAGTGAAGACTTCGATGTCCCAGTTGTTTCATCGGTCTACATGCATCTTCGCTCAATGGAGATGGAGAAAAAGAAAAGACCGATGATGGATTACATGGTTATAGTTCAGAGAGATATTACTCCGCATATGAGAGGGATTTTGATTGATTGGTTGGTTGAGGTTGCGGAAGAATACAAGCTTGTTCCTGATACGCTTCATCTTGCTGTTTCGTACATAGATAGGTTTCTGTCTTTTAATGATATCAATAGGACCAAGCTTCAGTTGTTGGGTGTTTCATCCATGCTCATTGCATCGAAACATGAAGAAATTAGCCCGCCTTATGTGGAAGAGTTTTGTTTTATAACCGACAATTCATATAACAAAGTTGAGGTTTTAGAGATGGAAGCTAACATACTCAAAACCCTAGAGTTTGATACAGCCAATCCAACTGTTAAGACTTTTCTAAGGAGGTTTAATGATATTGCCTGTGAGAAAAAAAATGTTTCAAGTTTGCAGTTTGAGTTCTTGAGTAACTATCTTGCCGAGCTAAGTTTATTGGATTGTGTTTGTTTGAGGTTCTTGCCTTCTTTGGTGGCTGCGTCTGTCACATTGCTTGCTCGATTCATTGTTTGGCCTAAAGCTTCCCCTTGGACACCAGCCCTGCAAGAATACTCTAGATATAAACCAGATGAGTTGAAAGAATGCGTTCTCATCTTACATGATTTGTATATGGCTAGAAGGGAAGCTTCATTTGATGCTTCTCGAGAGAAATACAAGCAGCATAAGTTTAAACATGTGGCAAACCTGCCTTCGCCTCCTCTTTTACCAAGTTCTCTGTTTGAAGTTGAGTGA 1005 0.401 MIETRSAKRKSNHQNQPNKKKRIVLGELPNSTNLIAPQKSLKNLNPRKPTPGKKNKIPSEDFDVPVVSSVYMHLRSMEMEKKKRPMMDYMVIVQRDITPHMRGILIDWLVEVAEEYKLVPDTLHLAVSYIDRFLSFNDINRTKLQLLGVSSMLIASKHEEISPPYVEEFCFITDNSYNKVEVLEMEANILKTLEFDTANPTVKTFLRRFNDIACEKKNVSSLQFEFLSNYLAELSLLDCVCLRFLPSLVAASVTLLARFIVWPKASPWTPALQEYSRYKPDELKECVLILHDLYMARREASFDASREKYKQHKFKHVANLPSPPLLPSSLFEVE 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g01841 334 Pfam Cyclin, N-terminal domain 74 197 IPR006671 -
Vivi3g01841 334 SUPERFAMILY Cyclin-like 70 196 IPR036915 -
Vivi3g01841 334 ProSitePatterns Cyclins signature. 102 133 IPR006671 -
Vivi3g01841 334 Gene3D - 70 319 - -
Vivi3g01841 334 SMART Cyclin_C_2 200 323 IPR004367 -
Vivi3g01841 334 FunFam Cyclin A1 187 319 - -
Vivi3g01841 334 Pfam Cyclin, C-terminal domain 200 322 IPR004367 -
Vivi3g01841 334 MobiDBLite consensus disorder prediction 31 45 - -
Vivi3g01841 334 PANTHER CYCLINS 33 311 IPR039361 -
Vivi3g01841 334 SUPERFAMILY Cyclin-like 200 324 IPR036915 -
Vivi3g01841 334 FunFam Mitotic cyclin 6 85 185 - -
Vivi3g01841 334 CDD CYCLIN_AtCycA-like_rpt2 200 314 - -
Vivi3g01841 334 Gene3D - 85 198 - -
Vivi3g01841 334 SMART cyclin_7 204 292 IPR013763 -
Vivi3g01841 334 SMART cyclin_7 107 191 IPR013763 -
Vivi3g01841 334 MobiDBLite consensus disorder prediction 1 60 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g01841 Vivi-Chr3 29798592 29801105 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g01841 4 332 Core Cell Cycle Gene Families AT5G43080 51.852 4.59e-119 345
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi3g01841 3 29798592 29801105 Vivi3g01852 3 30004140 30006300 PCT