Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g01815 ATGGCTTCGAGTTTTGATCGATGGGAAAAAGATCCTTTCTTTAACGCCGCTGAAGAAGTTCAAGAATCTGCTGATAGGGTAGAATCTACGTATAGGATATGGATTCATGCAATGAAGGATGCATCCAGTCCTTGGAACTCTGATGAACTTCGAAGAGATCTTCATACTGCCATGGGCACTGCTAAGTGGCAGTTAGATGAATTTCAACGGGCGGTGAAGTCGAGTTATAGGAAAAGTTCGAGTGATGATGCGAGAAATAGGCACCAAGATTTTGTTGTTGCGATTGAAGGCAAGATTTCGAAAGTGGAGAATTTGTTACGTCTGCATGAACCTGTTCCTTTAGGTAGCAAAGCGTCTCTGCCTTGGGTGTCGAATCTGTCGATGGATGAAGGAGAGCGAAATGAGCTTGCATCGTTTCTTTCAGGGATGCCGATGTCGCCTTCTGGTGGTAAACCGCCGGTTAGATTTACTGGGAGAGACAGTGTGAAACCACAATCAGGTGATACGGATTCGTTTAGAGCAGCGGTTGAGGTGGAGGAGAAACCATGTGGACATCGCAGGTTTGCTAGCGCCGATGCTGATATTAGTTCGTGGAAAATTGCTGTTTTGGATGATGTGCAAGTGCAACAATCGACTTCCTCTTATGATTCTTCTGGTCCTACTCCCATGCATAAGGTAGCCAGTGTCTCTGGGTTTTTTGGATCCGTGGAATCAATTTCTAAGTTTAAGTGGCCGAAGAATGGTTATAGAAAGCTGAAAGCAATGGATAGTAATCAAGAAACTGATAATGCACTACTACCGTCAACTCAATACAATGGGGACATCAATGATTGCAATGAAAAAAGTAGCATTTGCCTTCATAGTTGTGATGGATGTTATAGTAAGCCAATCCACGGGTGGTATGGAGCTTTCCAAAGACAGCTTCAAAGATCTCAATACCAAATGCAGTACAACCGGCCTGTTCAAATAGCTGTCTGGATAGTTATCATCCTTTGCTTAATTGTTTTAATTGCATTTTGTGCAATGTAG 1029 0.4315 MASSFDRWEKDPFFNAAEEVQESADRVESTYRIWIHAMKDASSPWNSDELRRDLHTAMGTAKWQLDEFQRAVKSSYRKSSSDDARNRHQDFVVAIEGKISKVENLLRLHEPVPLGSKASLPWVSNLSMDEGERNELASFLSGMPMSPSGGKPPVRFTGRDSVKPQSGDTDSFRAAVEVEEKPCGHRRFASADADISSWKIAVLDDVQVQQSTSSYDSSGPTPMHKVASVSGFFGSVESISKFKWPKNGYRKLKAMDSNQETDNALLPSTQYNGDINDCNEKSSICLHSCDGCYSKPIHGWYGAFQRQLQRSQYQMQYNRPVQIAVWIVIILCLIVLIAFCAM 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g01815 342 Gene3D - 9 108 - -
Vivi3g01815 342 PANTHER OS05G0443700 PROTEIN 1 334 - -
Vivi3g01815 342 FunFam Syntaxin 10 8 108 - -
Vivi3g01815 342 Pfam Syntaxin 6, N-terminal 11 103 IPR015260 GO:0016020|GO:0048193
Vivi3g01815 342 CDD SNARE_NTD_STX6-like 11 104 - -
Vivi3g01815 342 SUPERFAMILY t-snare proteins 10 104 IPR010989 GO:0016020|GO:0016192
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g01815 Vivi-Chr3 29331922 29334449 Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi3g01815 3 29331922 29334449 Vivi3g01815 3 29331922 29334449 ECH
Vivi4g05558 4 190839036 190841546 Vivi3g01815 3 29331922 29334449 PCT