Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g01804 ATGGACCCATCTATAGTCAAGCTTCTTGAAGATGATGAGGATGAAACTATGCATTCAGGAGCAGATGTTGAAGCGTTTCAAGCTGCATTAAATAGAGACATAGGCGGAGATGCTTCTAATTCTCAGCTTTCTGATTCAGATGCAGGAAGCAATAATTCATTCAGTCAATCATTACCAACGTGGCCAACTTCTAGCCATGACAACCAGACCGACTGTCAAAATCAGGAGCCTAAAATTGCTCAAGAGCAACCTTCATCTGAAATGGAGCTGAAGCAACAAGGACCTGTCGTGGAACAGATACAAAATGTTGCCTCACAAGATGCAAGCAATCCTACTTTATCACACAAACAATCTCAAGATGAATGTCTCCAACGCCAGACTGTACCGGTTTCCCACCAACATTCTCAAACAAATGAAGTTCAGAAATCCGAAAAAGATCCTGCCTTTAACCATGAGGTAATCAAAACAAATAATCCCAACTGTGAATCTCAGTATGCAAAATTGCAGCAGATGAGTAATCAACAGGCCACAGTTAATGAACAACCTAGTAGCCAAATCAATCGTAGTAAGCAGGTGCCATTTGGCTTATTGCTCCCTATCTTGATTCCCCAGCTTGCCAAAGATAGAGCCATGCAACTTACAACATTATTTAACAAATTGAAGAAAGATGAAATACCCAAAGATCATTTTGTACGGCTTATGAAGGGGATTGTGGGGGATCAGATGCTTAGAATAGCATTGACAAAAGTGCAACAACAGACTAAAGCCAACGCAGGTTCTTCTGGACAGCAGCACCCTGTAAGGATGCCAACGGTTACTTCCAGTGGAGCAAAATTTAATGATCCCCATGCATTAGCTCAACTGCATCAGAGAAGTTTGAATCCTGCTGCAGACCATTCTCATAATACTTCTTCAGCTATCCAAGTGAAGAGTGAACCGACCTATTCAACTATGGATGTTGGTGCTAAAAAATCTCAGGAACATGATGTTCGAGTAGTGCAACCAAATCAATTACCATCATCAGGTTCTAATGCTGTCAGTCAAGAAACTGAAAGATCCGCAGTTCACATGCAAGGCCTTAATAAGCAGCAACAACAGCATATACATTTCCCATCGACATATGGAAGCAGTGGTGGTAACTATAACCATTTTTCCGGGACAACTACTAGTTCATCATCTCTCAGACCACAACCTCATCCTCATGATTCACACATAAGGCAAATTGCACATCAGAATATTGGTTTAAATCACTTGGGTGTAGAACGACAGAGTTCTTTCACTGATCCTAAGAGAATGCCAGGTGGATCTGTGTCGACTGGTGTAAACAATACAGCACCACAACAAACTTCAACTTCTTGGCAACCTTCAGCAGAACAAAATTCTGGCTTGTTTTCATCTGTTTCATATGTAAAAAAGGAACCTAACGACCTTTCTATTGAGCAGCAACATAGGAATCATTTATCTAAATTGCATGGGTTGCCTTCTGTTAATTCTGGTCAAACTGAACCGGGTAGTGGTGTCAACCAAGGCACTGTGAAGGATGAGTTTTCAAGAGGTTCTTTAGCACTCACTGGCATGCCACACCCAACATCTGCTAGCTTGCCCACATCAAGCTCTGCATCTCAACTAGATCCAACTGTCTCTTTAAGCTCTCAGATCCCAGCTAGCACTTCTGGTATGGTGTCAAAGACACCTCTAAAAAGACCTCTTGGCCAGAAGAAACCACTTGAAACACTTGGTTCTTCACCTCCTCCTCCAAGTAAGAAACAAAAGGTGTCTGGGTCATCTCTGGAACAAAGCATTGAACAGCTTAATGATGTTACAGCTGTTAGTGGTGTTGATCTTAGGGAGGAGGAAGAACAGTTATTTTCTGGGTCCAAAGAGGACAGTCGAGCTTCAGAAGCATCTCGAAGAGTTGTGCAAGAAGAGGAAGAAAGTCTGATTTTGCTGAAAGCTCCATTGCAGAGAAAATTGATTGAAATTATGACTGAGTGTGGCTTGAAAGGCATGGGTAATGATGTTGAAAAATGCTTGTCACTGGTGAGATTAAATATATTTTTTCATTATTTATTACAAGTAGGGTTCCATGTAATCTTACGGCTGAAAATAAATGTGCAGTGTGTGGAAGAGCGAATGCGCGGAGTAATAAGTAACATAGTCAGAATGTCAAAACAGAGGGTTGATCTGGAGAAAACAAGGCATCGGACTGTTGTCACTTCAGATGTTCGACAGCAAATCATGGCAATGAATAGGAAAGCAAGGGAAGAGTGGGAGAAAAAACAGGCTGAAGTAGACAAGCTCCGGAAACTAAATGACGTAGAAGGTGGTTCCGGAGTTGATGGTGACAAGGACAAGGATGATGGTCGCAATAAAGCAACAAAGGTGAACAAGGAAGTAGATGACAAAATGAGGACAAATGCTGCAAATGTTGCAGCCCGAGCTGCTGTTGGGGGAGATGACATGCTGTCGAAGTGGCAACTTATGGCTGAGCAAGCCAGGCAGAAACGTGAAGGGGGAACAGACACTGCATCTGGTTCTCAGCCAACCAAAGATGTCAGTCGCAAATCTTCTCCATCATCAGGAAGGAGCACAAAAGACAATCAAGAAAGGGAGAGAAAAGGTCCAAATTCTCTTGGGAGTTCAGCGTCTGGTAGGAAGTTTGGGAAAAACCATTCCCCTGGATCTCAAACTCGCATAGCTCGTAGCATCTCTGTGAAGGATGTGATTGCAGTCTTGGAGAGGGAACCTCAGATGTCCAAATCGTCACTCTTATATCGATTGCATGAGAGAATCCATTCTGATGCTTCAACTGACTAA 2817 0.4256 MDPSIVKLLEDDEDETMHSGADVEAFQAALNRDIGGDASNSQLSDSDAGSNNSFSQSLPTWPTSSHDNQTDCQNQEPKIAQEQPSSEMELKQQGPVVEQIQNVASQDASNPTLSHKQSQDECLQRQTVPVSHQHSQTNEVQKSEKDPAFNHEVIKTNNPNCESQYAKLQQMSNQQATVNEQPSSQINRSKQVPFGLLLPILIPQLAKDRAMQLTTLFNKLKKDEIPKDHFVRLMKGIVGDQMLRIALTKVQQQTKANAGSSGQQHPVRMPTVTSSGAKFNDPHALAQLHQRSLNPAADHSHNTSSAIQVKSEPTYSTMDVGAKKSQEHDVRVVQPNQLPSSGSNAVSQETERSAVHMQGLNKQQQQHIHFPSTYGSSGGNYNHFSGTTTSSSSLRPQPHPHDSHIRQIAHQNIGLNHLGVERQSSFTDPKRMPGGSVSTGVNNTAPQQTSTSWQPSAEQNSGLFSSVSYVKKEPNDLSIEQQHRNHLSKLHGLPSVNSGQTEPGSGVNQGTVKDEFSRGSLALTGMPHPTSASLPTSSSASQLDPTVSLSSQIPASTSGMVSKTPLKRPLGQKKPLETLGSSPPPPSKKQKVSGSSLEQSIEQLNDVTAVSGVDLREEEEQLFSGSKEDSRASEASRRVVQEEEESLILLKAPLQRKLIEIMTECGLKGMGNDVEKCLSLVRLNIFFHYLLQVGFHVILRLKINVQCVEERMRGVISNIVRMSKQRVDLEKTRHRTVVTSDVRQQIMAMNRKAREEWEKKQAEVDKLRKLNDVEGGSGVDGDKDKDDGRNKATKVNKEVDDKMRTNAANVAARAAVGGDDMLSKWQLMAEQARQKREGGTDTASGSQPTKDVSRKSSPSSGRSTKDNQERERKGPNSLGSSASGRKFGKNHSPGSQTRIARSISVKDVIAVLEREPQMSKSSLLYRLHERIHSDASTD 938
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g01804 938 MobiDBLite consensus disorder prediction 34 137 - -
Vivi3g01804 938 CDD TAF4 599 926 IPR007900 GO:0005669|GO:0006352
Vivi3g01804 938 MobiDBLite consensus disorder prediction 33 148 - -
Vivi3g01804 938 MobiDBLite consensus disorder prediction 768 801 - -
Vivi3g01804 938 MobiDBLite consensus disorder prediction 425 459 - -
Vivi3g01804 938 Pfam Transcription initiation factor TFIID component TAF4 family 707 927 IPR007900 GO:0005669|GO:0006352
Vivi3g01804 938 Pfam Transcription initiation factor TFIID component TAF4 family 604 680 IPR007900 GO:0005669|GO:0006352
Vivi3g01804 938 ProSiteProfiles RST domain profile. 185 256 IPR022003 -
Vivi3g01804 938 MobiDBLite consensus disorder prediction 524 563 - -
Vivi3g01804 938 MobiDBLite consensus disorder prediction 363 403 - -
Vivi3g01804 938 PANTHER TRANSCRIPTION INITIATION FACTOR TFIID SUBUNIT 4 14 680 IPR045144 GO:0005669|GO:0006352
Vivi3g01804 938 MobiDBLite consensus disorder prediction 829 904 - -
Vivi3g01804 938 MobiDBLite consensus disorder prediction 363 398 - -
Vivi3g01804 938 MobiDBLite consensus disorder prediction 294 314 - -
Vivi3g01804 938 Pfam RCD1-SRO-TAF4 (RST) plant domain 188 252 IPR022003 -
Vivi3g01804 938 MobiDBLite consensus disorder prediction 618 637 - -
Vivi3g01804 938 MobiDBLite consensus disorder prediction 491 515 - -
Vivi3g01804 938 MobiDBLite consensus disorder prediction 583 598 - -
Vivi3g01804 938 MobiDBLite consensus disorder prediction 874 902 - -
Vivi3g01804 938 MobiDBLite consensus disorder prediction 490 598 - -
Vivi3g01804 938 Coils Coil 750 770 - -
Vivi3g01804 938 MobiDBLite consensus disorder prediction 838 863 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g01804 Vivi-Chr3 29234228 29243040 Dispersed/Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi3g01804 3 29234228 29243040 Vivi3g01804 3 29234228 29243040 ECH