Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g00525 ATGGCATTCCCAATTCCACACCTTATCTCTTCACCGTACAACCCTTTGTTAAACCTCACTCCACTCTCATTAAACCCTAAAATCCCATTCTCAACTACTACACCGCCGCCGCCGTCGCATATTGATGTTCGCCACCACTCTCGCCGCCGTAAGTCTACTTCCCTCCTCCGTTGCTCGGCGTCGTCTTTCCCGGACAAGCACAACGGTAACTCTAACTCTCCTAATTCGGATGATGTCACCGAACTTCCTCTGTTTCCTCTTCCTTTGGTTCTCTTCCCCGGAGCAATCCTCCCTCTCCAGATCTTCGAGTTTCGCTACCGCGTCATGATGCATACGCTTCTCCACACCGATCTCCGATTCGGCGTTATCTACACCGACGCGGTGACCGGAACGGCGGAAGTCGGTTGCGTTGGAGAAGTTATAAAACACGAAAGACTTGTCGATGATCGATTCTTCTTGATCTGCAAAGGTCAGGAGCGTTTCCGCGTGAAGAAAGTTGTTCGGACGAAACCCTACCTTGTCGCGAGTGTTGCGTGGCTGGAGGATCGGCCTTCTCCGGCAACTGACGTAGATGTTGACGGTTTGGCGAGCGAGGTGGAGACGTATATGAAGGATGTGATTCGGTTATCGAATCGGTTAGGTGGAAAGGCGGAGAAAGAGGTTGGTGATTTGAGGAGGAACTTGTTTCCGACGCCGTTTTCGTTTTTTGTTGGAAGCACGTTTGAAGGCGCGCCGAGAGAGCAACAGGCGCTGTTGGAGTTGGAAGATACTGCGGCGAGATTAGCGAGGGAGAAGGAGACTTTGAAGAACACGCTTAATTACTTGTCTGCTGCTTCTGCTGTCAAAGACGTTTTTCCATCTTCTTCATCTCCGTCTCCCCCTTCCTCTTGA 891 0.5118 MAFPIPHLISSPYNPLLNLTPLSLNPKIPFSTTTPPPPSHIDVRHHSRRRKSTSLLRCSASSFPDKHNGNSNSPNSDDVTELPLFPLPLVLFPGAILPLQIFEFRYRVMMHTLLHTDLRFGVIYTDAVTGTAEVGCVGEVIKHERLVDDRFFLICKGQERFRVKKVVRTKPYLVASVAWLEDRPSPATDVDVDGLASEVETYMKDVIRLSNRLGGKAEKEVGDLRRNLFPTPFSFFVGSTFEGAPREQQALLELEDTAARLAREKETLKNTLNYLSAASAVKDVFPSSSSPSPPSS 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g00525 296 SMART lon_5 81 270 IPR003111 -
Vivi3g00525 296 PANTHER ATP-DEPENDENT PROTEASE LA (LON) DOMAIN PROTEIN 45 290 - -
Vivi3g00525 296 MobiDBLite consensus disorder prediction 28 55 - -
Vivi3g00525 296 Pfam ATP-dependent protease La (LON) substrate-binding domain 81 269 IPR003111 -
Vivi3g00525 296 SUPERFAMILY PUA domain-like 81 269 IPR015947 -
Vivi3g00525 296 Coils Coil 251 271 - -
Vivi3g00525 296 Gene3D - 79 182 IPR046336 -
Vivi3g00525 296 ProSiteProfiles Lon N-terminal domain profile. 82 270 IPR003111 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g00525 Vivi-Chr3 8855513 8856758 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi3g00525 3 8855513 8856758 Vivi3g00525 3 8855513 8856758 ECH
Vivi3g00525 3 8855513 8856758 Vivi3g00525 3 8855513 8856758 PCT