Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g00524 ATGGCTGAAGAGGGACAAGTTATCGGTGTTCACAGCGTGGACGCATGGAAGGAACAGCTCGAGAAGGGAAATGCCTCAAAGAAACTGATTGTAGTTGATTTCACTGCTTCTTGGTGTGGTCCATGCCGTTTCATTGCTCCAATTTTGGCAGAGATTGCTAAAAAGCTTCCAGAGGTCATCTTCCTTAAGGTTGATGTGGATGAATTGAAGACTGTTTCTGAGGAGTGGGGAATTGAAGCTATGCCAACATTCCTGTTCTTGAAAGAGGGAAAACTTGTGGACAAAGTTGTGGGTGCTAAGAAGGAGGAGCTGCAGTTGACAATTAGCAAGCATGCAACTGCTGCTTCTGCTTCTGCTTGA 360 0.4556 MAEEGQVIGVHSVDAWKEQLEKGNASKKLIVVDFTASWCGPCRFIAPILAEIAKKLPEVIFLKVDVDELKTVSEEWGIEAMPTFLFLKEGKLVDKVVGAKKEELQLTISKHATAASASA 119
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g00524 119 Gene3D Glutaredoxin 1 118 - -
Vivi3g00524 119 PANTHER THIOREDOXIN 7 110 - -
Vivi3g00524 119 CDD TRX_family 18 103 - -
Vivi3g00524 119 ProSitePatterns Thioredoxin family active site. 31 49 IPR017937 -
Vivi3g00524 119 SUPERFAMILY Thioredoxin-like 5 112 IPR036249 -
Vivi3g00524 119 PRINTS Thioredoxin family signature 30 38 - -
Vivi3g00524 119 PRINTS Thioredoxin family signature 77 88 - -
Vivi3g00524 119 PRINTS Thioredoxin family signature 38 47 - -
Vivi3g00524 119 ProSiteProfiles Thioredoxin domain profile. 1 113 IPR013766 -
Vivi3g00524 119 FunFam Thioredoxin 6 113 - -
Vivi3g00524 119 Pfam Thioredoxin 10 108 IPR013766 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g00524 Vivi-Chr3 8853711 8855075 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi3g00524 3 8853711 8855075 Vivi3g00524 3 8853711 8855075 ECH
Vivi4g05852 4 195041409 195043156 Vivi3g00524 3 8853711 8855075 PCT