Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g00517 ATGGACTCTACTTCATTTCCAAAGCTACTAGTAGTAATGATGCTCTTTGTTTTGGTTTTGGATTGTGAATGCAATGTTACTTATGATAGAAAGTCTCTTCTTATCAATGGCCAAAGAAAAATCTTGATTTCTGGTTCCATTCACTATCCTAGAAGCACCCCTGAGATGTGGGAAGATCTAATTCGGAAGGCGAAACATGGTGGTCTTGATGTTATTGACACTTATGTCTTTTGGGATGTTCATGAACCATCTCCTCACAATTACAATTTTGAAGGAAGATATGATCTAGTTAGGTTCATTAAGACAGTGCAAAAAGTGGGGCTTTATGTTAATCTTCGCATTGGACCTTATGTTTGCGCTGAGTGGAACTTTGGAGGAATTCCTGTTTGGTTGAAGTATGTTCCTGGTATAAGCTTTAGAACGGATAATGAGCCTTTCAAGGCTGCAATGCAAGGTTTTACTCAGAAGATTGTTCAAATGATGAAGAGTGAAAACTTGTTTCAGTCTCAGGGTGGTCCAATCATTCTTTCTCAGATTGAGAACGAATACGGACCAGAGAGCAAGGCGATGGGAGCTGCTGGTCATGCATACCTAAACTGGGCTGCATATATGGCTGTTGGATTGGGAACAGGAGTCCCTTGGGTGATGTGCAAAGAAATTGATGCCCCAGATCCTGTGATTAATTCGTGTAATGGCTTTTACTGTGACGATTTCTCTCCAAATAAACCATATAAGCCTAGCATGTGGACTGAGTCTTGGAGTGGCTGGTTTACCGAATTTGGTGGCCCGATTCACCAGAGACCAGTTCAAGATCTTGCATTCGCAGTTGCTCGTTTCATTCAGAAGGGCGGATCATATGTGAATTACTACATGTACCATGGAGGAACTAACTTTGGACGATCGGCTGGGGGTCCGTTCATTACTACAAGCTACGACTATGATGCTCCAATCGATGAATATGGTTTGATTAGGCAACCAAAATATAGTCATTTGAAGGATCTTCATAAAGCTATCAAGCGATGCGAGCATGCTTTGGTTTCTTCGGATCCTACTGTTACATCATTAGGAACTTATCAGCAGGCTCATGTATTCTCTGCAGGAACTGCAGGATGCGCGGCTTTTCTAGCAAACTATCACGTACAATCTGCCGCTACCGTAGTTTTCAATAATAAGCACTATGACTTGCCTCCGTGGTCCATAAGCATCCTTCCCGATTGCAGAACTTCCGTATTTAATACCGCAAAAGTGAGAACTCAAACTTCAGTGGTAAAAATGCTTCATGTCAATTCTAGATTCTCGTGGGAGACCTATGATGAAGATCTATCTTCTCTGGATGAAAGATCGAGGATTACAGCTACTGGACTCTTGGAACATCTGAACGTCACGAGAGACACCAGTGATTATCTATGGTACATAACCAATGTTGACATAAGCTCATCAGAATCGTTTCTTCGAGGAGGACACAAACCGAGCATTAATGTGCAATCTGCAGGACATGCTGTCCATGTGTATGTCAATGGGAAATTCTTAGGGTCGGCTTTTGGGACAAGGAAACAAAGAAGTTGCACATTTAACGGGCCAGTTAACCTACACGCTGGGACTAATAAAATTGCTCTTCTCAGCGTGACTGTTGGATTGCAGAACGCTGGCCGGCATTATGAGACATGGGAGACAGGAATCACTGGTCCAGTTTTGATACATGGTCTCGACCATGGACCGAAAGATTTGACGCATAATAAATGGTCTTATCAGGTTGGCCTTAAAGGAGAGGCTGTGAATTTGGCGTCACCGGATGAGGTCTCATCTGTTGATTGGGTCCAAGATTCACTAGCTGTCCGAAGCCAATCACAACTGAAATGGCACAAGGCGTATTTTAACGCACCTGAGGGAAACGAACCGTTGGCTTTGGACCTTGAAAGTATGGGCAAGGGCCAAGTATGGATCAATGGACAAAGCATAGGAAGATATTGGATGACTTATGCAACCGGTGACTGTAATTCTTGCAGCTATTCGGGAACATTCAAGCCTGCGAAGTGCCAACTTGGTTGTGGACGACCCACTCAACGATGGTATCACGTCCCAAGGTCGTGGCTAAAGCCAACAAAGAACCTGATAGTAGTGTTTGAAGAATTAGGCGGAAATCCTTGGAAAATATCGTTGCTAAAGAGAACAGTACATACCGCAGCAGTTCGTGAATAA 2199 0.4334 MDSTSFPKLLVVMMLFVLVLDCECNVTYDRKSLLINGQRKILISGSIHYPRSTPEMWEDLIRKAKHGGLDVIDTYVFWDVHEPSPHNYNFEGRYDLVRFIKTVQKVGLYVNLRIGPYVCAEWNFGGIPVWLKYVPGISFRTDNEPFKAAMQGFTQKIVQMMKSENLFQSQGGPIILSQIENEYGPESKAMGAAGHAYLNWAAYMAVGLGTGVPWVMCKEIDAPDPVINSCNGFYCDDFSPNKPYKPSMWTESWSGWFTEFGGPIHQRPVQDLAFAVARFIQKGGSYVNYYMYHGGTNFGRSAGGPFITTSYDYDAPIDEYGLIRQPKYSHLKDLHKAIKRCEHALVSSDPTVTSLGTYQQAHVFSAGTAGCAAFLANYHVQSAATVVFNNKHYDLPPWSISILPDCRTSVFNTAKVRTQTSVVKMLHVNSRFSWETYDEDLSSLDERSRITATGLLEHLNVTRDTSDYLWYITNVDISSSESFLRGGHKPSINVQSAGHAVHVYVNGKFLGSAFGTRKQRSCTFNGPVNLHAGTNKIALLSVTVGLQNAGRHYETWETGITGPVLIHGLDHGPKDLTHNKWSYQVGLKGEAVNLASPDEVSSVDWVQDSLAVRSQSQLKWHKAYFNAPEGNEPLALDLESMGKGQVWINGQSIGRYWMTYATGDCNSCSYSGTFKPAKCQLGCGRPTQRWYHVPRSWLKPTKNLIVVFEELGGNPWKISLLKRTVHTAAVRE 732
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g00517 732 Gene3D Glycosidases 20 341 - -
Vivi3g00517 732 Gene3D - 398 567 - -
Vivi3g00517 732 PRINTS Glycosyl hydrolase family 35 signature 36 53 IPR001944 GO:0004553|GO:0005975
Vivi3g00517 732 PRINTS Glycosyl hydrolase family 35 signature 112 131 IPR001944 GO:0004553|GO:0005975
Vivi3g00517 732 PRINTS Glycosyl hydrolase family 35 signature 305 321 IPR001944 GO:0004553|GO:0005975
Vivi3g00517 732 PRINTS Glycosyl hydrolase family 35 signature 169 184 IPR001944 GO:0004553|GO:0005975
Vivi3g00517 732 PRINTS Glycosyl hydrolase family 35 signature 616 630 IPR001944 GO:0004553|GO:0005975
Vivi3g00517 732 PRINTS Glycosyl hydrolase family 35 signature 248 263 IPR001944 GO:0004553|GO:0005975
Vivi3g00517 732 PRINTS Glycosyl hydrolase family 35 signature 57 75 IPR001944 GO:0004553|GO:0005975
Vivi3g00517 732 PRINTS Glycosyl hydrolase family 35 signature 643 659 IPR001944 GO:0004553|GO:0005975
Vivi3g00517 732 PRINTS Glycosyl hydrolase family 35 signature 285 300 IPR001944 GO:0004553|GO:0005975
Vivi3g00517 732 FunFam Beta-galactosidase 443 580 - -
Vivi3g00517 732 PANTHER BETA-GALACTOSIDASE RELATED 18 728 IPR001944 GO:0004553|GO:0005975
Vivi3g00517 732 FunFam Beta-galactosidase 21 341 - -
Vivi3g00517 732 FunFam Beta-galactosidase 588 729 - -
Vivi3g00517 732 SUPERFAMILY Galactose-binding domain-like 400 570 IPR008979 -
Vivi3g00517 732 Gene3D - 591 729 - -
Vivi3g00517 732 SUPERFAMILY (Trans)glycosidases 25 342 IPR017853 -
Vivi3g00517 732 FunFam Beta-galactosidase 290 418 - -
Vivi3g00517 732 Pfam Glycosyl hydrolases family 35 32 337 IPR031330 -
Vivi3g00517 732 Pfam Beta-sandwich domain in beta galactosidase 345 416 IPR041392 -
Vivi3g00517 732 SUPERFAMILY Galactose-binding domain-like 578 721 IPR008979 -
Vivi3g00517 732 ProSitePatterns Glycosyl hydrolases family 35 putative active site. 171 183 IPR019801 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g00517 Vivi-Chr3 8822254 8826644 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi3g00517 3 8822254 8826644 Vivi3g00517 3 8822254 8826644 ECH
Vivi4g05851 4 195037066 195041329 Vivi3g00517 3 8822254 8826644 PCT