Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g00369 ATGGGTTCTGACGGAGCAACCTCGGCGGCGAACAGCCGCAGGAAACCGTCGTGGAGGGAGAGAGAGAACAACAGGAGAAGAGAGAGACGGAGGAGAGCCATAGCGGCGAAGATTTACGCGGGATTGAGGTCTCAGGGGAACTATAATTTGCCTAAACACTGTGATAACAATGAAGTCTTGAAAGCTCTCTGTGTTGAAGCTGGTTGGACCGTTGAAGAAGACGGCACAACCTATCGAAGAGGATCAAGGGCAGCAACATCAGGCGATGGAGCCGGAGCTTGTACCAGAAATAACCTATTTTCATCGCAAAATCCAAGTCCTCTTTCGTCGTCATTTCCAAGTCCAATCCATTCTTACCAAGTTAGCCCGTCCTCTTCTTCGTTTCCGAGCCCGACTCGTATGGATACAAATAATAACCCATCAAATTTCATTCCATACGTTCGCAACGTTTTCCCCAACATGTCTCTCCCGCCTTTGAGAATATCAAACAGCGCACCTGTGACGCCGCCTATCTCATCACCAACCTCGAGAAATCCCAAACCCATGATCCCCACATGGGATTCAATCGCCAAAGCATCGATTACTTCCTTCAATCACCCTTTCTTTGCAGCTTCTGCACCGTCTAGCCCGTCGCACCGTCACCTTTATACACCACCTACTATACCTGAATGTGATGAGTCTGATACTTCCACTATCGAGTCTAGTCAGTGGTTGAACTTCCAAGCCTTTGCAGCTTCTGCTAAATCATCGGTCTCTCCTACATTGAACTTTCTGAAACCTGTAATTAACGAGCCGCATAACATGCTGCCTGAAAACAGAATGCAAGAGATGAGGATTTCAGAGCCCGAGTTCGGAGCACAGGTGGTGAAGCCTTGGGTTGGAGAAAGGATTCATGAAGTTGGGTTGGATGATTTGGAGCTTACTCTTGGAAATGGAAAGGCGCCTAGTTAA 951 0.4805 MGSDGATSAANSRRKPSWRERENNRRRERRRRAIAAKIYAGLRSQGNYNLPKHCDNNEVLKALCVEAGWTVEEDGTTYRRGSRAATSGDGAGACTRNNLFSSQNPSPLSSSFPSPIHSYQVSPSSSSFPSPTRMDTNNNPSNFIPYVRNVFPNMSLPPLRISNSAPVTPPISSPTSRNPKPMIPTWDSIAKASITSFNHPFFAASAPSSPSHRHLYTPPTIPECDESDTSTIESSQWLNFQAFAASAKSSVSPTLNFLKPVINEPHNMLPENRMQEMRISEPEFGAQVVKPWVGERIHEVGLDDLELTLGNGKAPS 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g00369 316 MobiDBLite consensus disorder prediction 80 117 - -
Vivi3g00369 316 MobiDBLite consensus disorder prediction 91 117 - -
Vivi3g00369 316 PANTHER BES1/BZR1 HOMOLOG PROTEIN 3-RELATED 7 313 IPR033264 GO:0003700|GO:0006351|GO:0009742
Vivi3g00369 316 MobiDBLite consensus disorder prediction 1 30 - -
Vivi3g00369 316 Pfam BES1/BZR1 plant transcription factor, N-terminal 12 142 IPR008540 -
Vivi3g00369 316 MobiDBLite consensus disorder prediction 14 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g00369 Vivi-Chr3 6577285 6579285 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BES1 Vivi3g00369 BES1_N 1.6e-57 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi3g00369 3 6577285 6579285 Vivi3g00369 3 6577285 6579285 ECH
Vivi3g00369 3 6577285 6579285 Vivi3g00369 3 6577285 6579285 PCT