Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g07577 ATGCGTATGAATATTGAAGATATTCGGAAGCTTTTTCAGATCAAGATGGATAAATTGGGAACATTATTGGTTTTCAGTTTCATAACGTTCTCTCTATTACTCATTTTCAGTGTTAAACACCAAATCTCAATCTTCGATTTTGTTGCCGGATTTCCCAACCGCAATGTTACTTCTTCTTCAACCGTCTTGAAACAAGGAGCTTCAAATATTACGGTGTTGGGAGATAAAGATTATCACAAGACACAAACGATCTTAGATATTGACCAAAAGAAGGATACATCTCTATCTTCTATTAGCATTGCTAATGACCAATTACTTGATGGACTTCTAGTTTCTGCATTCGAAGAAGCATCGTGCTTAAGTAGGTATCAATCTCATTTATACCGCAAACCTTCCCCTTATAAACCTTCCGCATATCTCATATCCAAGCTACGAAGCTATGAAAATCTTCATACAACTTGTGGACCTCGTACAGAATCATACAATAAAGTCATGACAAAGGGCCCAAAACTTGGCACAAATTGCAAATATCTTATTTGGACAGCTTCCAATGGATTGGGGAACAGGATGATAACCTTGGCTGCGGCGTTTCTCTATGCAATACTCACGGACCGGGTTTTACTTGTCGAATTTGGGGATGACATGTTTGGTCTCTTTTGTGAGCCATTTCCTAATTCCTCGTGGTTATTACCAAGGAGTTTTCCTTATTGGAATGATCAGAAAGATATTGAAACTTATGAAAACATGCTAATGAATAGCAAGAAAAACAGATCAAATGGGCTTTTGCCGCAATTTCTCTTTCTTAATCTACAGCACACCCGTGATGGTCATAACAATTTCTTTCATTGCGATCAAAGTCAAGGTCTTCTCCAAAATGTTTCCGTTCTAATTTTATCGTCGGATCAATATTTTGTCCCTTCGCTTTTTATGATTCCATCATTTACGCAAGAACTAAACAAAATGTTCCCTAGGAAAGACACCGTTTTTCACCATTTGGGGCGTTACCTTTTCCACCCGTCCAATGAGGCGTGGGATCTAATTAGCAGGTTCTATGGGGAACACTTATCCAAGGAAAATGAGAAAATTGGTTTGCAGATTAGAGTATTCAAAACTCACCGAGCACCACATGAAACCATTATCAAAGAAATTCTAGCTTGCACCCTTCAGCATAAGCTGCTTCCAGAATTCGGCGTGCAGAAGACAGTAGCGGCACCTCTTTTAAAAAAGCAAACATCAAAAGCTGTTCTAGTGGCATCTCTATATTCCGAATATGGCGAGAAGCTGAGGACTATGTATAAGGCAAATACAACTGTGACCGGGGAGGTAATAAATGTTTATCAGCCAAGTCATGAAGGGCGTCAAAAATCAAATAATGACACGCACAATATTCAAGCGTGGACGGAAATATATCTGCTGAGTTTGTGTGATGCACTGGTCACTAGCCCCAAGTCTACTTTTGGGTATGTTGCTCATAGTCTTGGAGGTTTAAAGCCATGGATTCGTCAGAGGGCAAAGGGGGAAACCATCCCAAATCCACCTTGTCGACGAGCCAAGTCCATGGAGCCTTGTTTCCATTATCCTCCAAAGTATAATTGTAGGGCCAACAGCACAGTTGATTTTACTTCCCTTTTTCATCACATGAAGCATTGTGAAGATGTATCTAAAGGATTGAGGTTGGTGAATGCTGATCATTAG 1695 0.3982 MRMNIEDIRKLFQIKMDKLGTLLVFSFITFSLLLIFSVKHQISIFDFVAGFPNRNVTSSSTVLKQGASNITVLGDKDYHKTQTILDIDQKKDTSLSSISIANDQLLDGLLVSAFEEASCLSRYQSHLYRKPSPYKPSAYLISKLRSYENLHTTCGPRTESYNKVMTKGPKLGTNCKYLIWTASNGLGNRMITLAAAFLYAILTDRVLLVEFGDDMFGLFCEPFPNSSWLLPRSFPYWNDQKDIETYENMLMNSKKNRSNGLLPQFLFLNLQHTRDGHNNFFHCDQSQGLLQNVSVLILSSDQYFVPSLFMIPSFTQELNKMFPRKDTVFHHLGRYLFHPSNEAWDLISRFYGEHLSKENEKIGLQIRVFKTHRAPHETIIKEILACTLQHKLLPEFGVQKTVAAPLLKKQTSKAVLVASLYSEYGEKLRTMYKANTTVTGEVINVYQPSHEGRQKSNNDTHNIQAWTEIYLLSLCDALVTSPKSTFGYVAHSLGGLKPWIRQRAKGETIPNPPCRRAKSMEPCFHYPPKYNCRANSTVDFTSLFHHMKHCEDVSKGLRLVNADH 564
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g07577 564 Gene3D - 172 253 - -
Vivi2g07577 564 PANTHER FUCOSYLTRANSFERASE 2-RELATED 28 561 IPR004938 GO:0008107|GO:0016020|GO:0042546
Vivi2g07577 564 Gene3D - 345 500 - -
Vivi2g07577 564 Pfam Xyloglucan fucosyltransferase 100 533 IPR004938 GO:0008107|GO:0016020|GO:0042546
Vivi2g07577 564 FunFam Galactoside 2-alpha-L-fucosyltransferase 173 224 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g07577 Vivi-Chr2 221081153 221083237 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g07577 99 560 Xyloglucan Fucosyltransferase1 AT2G03220 50.947 8.86e-165 478
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g07577 K13681 - gmx:100799776 795.038
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi2g07577 2 221081153 221083237 Vivi5g00132 5 1760095 1763176 PCT