Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g07569 ATGGATAAATTAGGGTTTAGTTTGAGGAAATTGGGAACATTATTGGTTTTCAGTTTCATAACATTCTCTCTATTACTCATATTCAGTGTTAAACACCAAAACTCAATCTTTGATTTTGTTGCCGGATTTCCTAACCGCAGTCTTACTTCTTCTTCTTCAACTGTCTTGAAAGAAGGAGCTTCAAATATTACAGTTAAAACAGAATCAGCGGTAGGTCCAAAAAATCATTCACTTGAAGACCAAAAGAAGGAAGATACATCTCTATCTTCTACCAGTATTGCTAATGATCAATTACTTGATGGACTTCTAGTTTCTGCATTCGAAGAAGCATCGTGCTTAAGTAGGTTTCAATCTCACTTATACCGTAAAGCTTCCCCTTATAAACCTTCCGCATATCTGATATCCAAGCTACGAAACTATGAAAATCTTCATACAAGTTGTGGACCTCGTACAAAATCATACAATAAAGTCATGACAAAGGGCCCAAAACTTGGCAAAAATGATGCAGGTACAAATTGCAAGTACCTTGTCTGGACAGCTTCCAATGGATTGGGGAATAGGATGATAACCTTGGTTGCAGCATTTCTTTATGCTATCCTCACGGACCGGGTTTTACTTGTGAAATTTGGGACTGACATGTTTGGTCTCTTTTGTGAGCCATTTCCTAATTCCTCATGGTTATTGCCAAGAAATTTTCCTTATTGGAAAGATCAGAAACATATTGAAACTTATGAAAACATAATGAATAGCAAGAAATATAGATCAGAGGGACTTTTGCCGCAATTTCTCATTCTTAATCTACAGCACACCCATGATGGTCATAACAACTTCTTTCATTGTGATCGAAGTCAGGGTTTTCTCCAAAAAGTTTCCGTTCTAATTTTGTCGTCGGATCAATATTTTGTCCCTTCTCTTTTTATGATTCCATCATTTACGCAAGAACTAAGCAAAATGTTCCCTAAGAAAGACACTGTTTTTCACCATTTGGGGCGTTACCTTTTCCACCCGTCCAATGAAGCATGGGAACTAATTAGCAGGTTCTATGAGGAACACTTAGCCAAGGAAAATGAGAAAATTGGCTTGCAGATTAGAGTATACAACACTCACCGAGCATCACATGAAACCATTATTAATGAAATTCTAGCCTGCACCCATCAGCATAAGCTGCTGCCTGATATCGGTGTGCCTAAGACATCAGTGACATCTGTTTTAAAGAAGCAAACATCAAAAGCAGTTCTAGTAGCATCTCTATATTCCGAATATGGTGAGAAGCTGAGGACTATGTATAAGGCAAATACAACTGTGACCGGGGAGGTAATAAATGTTTATCAGCCAAGTCATGAAGGGCGTCAAAAATCAAATAATGACACGCACAATATTAAAGCATGGGCGGAAATATATCTGCTGAGTTTGTGTGATGCATTGATCACAAGCCCCAAGTCTACTTTTGGGTATGTTGCTCATAGTCTTGGAGGTTTAAAGCCATGGATTCTTGAGAGGGCATATGGGGAAAACATCCCAAATCCACCTTGTCGACGAGCCAAGTCCATGGAGCCTTGTTTCCATTATCCTCCAAAGTATGATTGTAGGGCCAACAGCACAATTGATTATACTTCCCTTTTTCATCACATGAAGCATTGTGAAGATGTATCTAAAGGATTGAGGTTGGTTAATACTGATCATTAG 1686 0.3849 MDKLGFSLRKLGTLLVFSFITFSLLLIFSVKHQNSIFDFVAGFPNRSLTSSSSTVLKEGASNITVKTESAVGPKNHSLEDQKKEDTSLSSTSIANDQLLDGLLVSAFEEASCLSRFQSHLYRKASPYKPSAYLISKLRNYENLHTSCGPRTKSYNKVMTKGPKLGKNDAGTNCKYLVWTASNGLGNRMITLVAAFLYAILTDRVLLVKFGTDMFGLFCEPFPNSSWLLPRNFPYWKDQKHIETYENIMNSKKYRSEGLLPQFLILNLQHTHDGHNNFFHCDRSQGFLQKVSVLILSSDQYFVPSLFMIPSFTQELSKMFPKKDTVFHHLGRYLFHPSNEAWELISRFYEEHLAKENEKIGLQIRVYNTHRASHETIINEILACTHQHKLLPDIGVPKTSVTSVLKKQTSKAVLVASLYSEYGEKLRTMYKANTTVTGEVINVYQPSHEGRQKSNNDTHNIKAWAEIYLLSLCDALITSPKSTFGYVAHSLGGLKPWILERAYGENIPNPPCRRAKSMEPCFHYPPKYDCRANSTIDYTSLFHHMKHCEDVSKGLRLVNTDH 561
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g07569 561 Pfam Xyloglucan fucosyltransferase 91 530 IPR004938 GO:0008107|GO:0016020|GO:0042546
Vivi2g07569 561 Gene3D - 341 497 - -
Vivi2g07569 561 FunFam Galactoside 2-alpha-L-fucosyltransferase 171 222 - -
Vivi2g07569 561 Gene3D - 170 243 - -
Vivi2g07569 561 PANTHER FUCOSYLTRANSFERASE 2-RELATED 20 558 IPR004938 GO:0008107|GO:0016020|GO:0042546
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g07569 Vivi-Chr2 220934656 220937669 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g07569 91 557 Xyloglucan Fucosyltransferase1 AT2G03220 51.271 1.60e-167 485
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g07569 K13681 - gmx:100799776 854.744